Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710077

Identifier: 218710077

GI number: 218710077

Start: 2250740

End: 2251669

Strand: Direct

Name: 218710077

Synonym: VS_2098

Alternate gene names: NA

Gene position: 2250740-2251669 (Clockwise)

Preceding gene: 218710072

Following gene: 218710078

Centisome position: 68.22

GC content: 43.98

Gene sequence:

>930_bases
ATGACCCTCGGTATCAATATGAAAAACACTAAAATAATTTCCCTACTCTTAAGCGGTGCGGCTATCGCTTACTCCGGTTC
TGCGCTGGCTGAAAAGGAACAACTCTCAGTTCAAGAAGCGGCAAAAAAATCAGCAAACCCAGTATCAGATGTATGGATGC
TAATTACTCAAAATGATTATACTTTTCTAGAAAAAGAAGATGGTCACCATGAGATGCAAAACCGCTTCAGCTTTCAACCA
GTAATGCCGGTTCCTATAATGGATGGTGAATGGAACTTGGTGAACCGTTTGGTTGCCAACCACTACAGTTCACCAGGCGA
TCGTGAAAACGGTGATTTCTTTGAAGGACGTACAAACGGTATGGGAGACACTGTCTTTCTATCAATGGCTGCCCCTAACC
GTGATGACGGGTGGATTTGGGGTGTTGGTCCAACGATGATCATGCCAACAGGTACTGATGGTTTAACGCAAGACAAGTGG
CAAGTCGGCCCTGCAGCAATGGTCGCTCGCCTTGGTAAAGAAACCGGTAACCCAACCAGTATTGAAAGCTGGAACGTTGG
TTTCTTAGCTCAGCAATGGTGGGACGTGGGCGGCAGTGACAGCGTTACTGAGTCAACCAATCAAGCGGACATCCAGTATT
TCTTAAACTATCGTGTCAGCAACACCGCGTTAATTGGTATGACACCTAATATTCAAATTGATTGGACAAAAGATGGTTCC
GACCAATTTACTGTACCTGTCGGATTAGGCTATATCGATATGTTTAAGGTTGGGCCAATGCCAGTTCGTTGGGGTGTAGA
ACTTCAATATTACGTAATGAAACCAGATGCAAATGTTAATACAACCAATCCAGCTGAGTATGTGCCATATGCACCAGATT
GGAACCTGAAATTCTTTATTGCTCCTGTTACATTAAACCCGTTCAAATAA

Upstream 100 bases:

>100_bases
CGCGCTTTGAAATCACAACATTGTCTCAAATTACATGACACTGAGTTTCCGTTCGGTACATATACATTCCTTTTGTGAAT
ACTACAATGGCACCAAAATA

Downstream 100 bases:

>100_bases
TCGATTTAAATCCCCCTACAGGCTGGTCTAATTTATTTAATATTTTAGGCCAGTCTTTTTAGCACTTTTCATCGACTTCT
ATGATCCAAACCAAGTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTLGINMKNTKIISLLLSGAAIAYSGSALAEKEQLSVQEAAKKSANPVSDVWMLITQNDYTFLEKEDGHHEMQNRFSFQP
VMPVPIMDGEWNLVNRLVANHYSSPGDRENGDFFEGRTNGMGDTVFLSMAAPNRDDGWIWGVGPTMIMPTGTDGLTQDKW
QVGPAAMVARLGKETGNPTSIESWNVGFLAQQWWDVGGSDSVTESTNQADIQYFLNYRVSNTALIGMTPNIQIDWTKDGS
DQFTVPVGLGYIDMFKVGPMPVRWGVELQYYVMKPDANVNTTNPAEYVPYAPDWNLKFFIAPVTLNPFK

Sequences:

>Translated_309_residues
MTLGINMKNTKIISLLLSGAAIAYSGSALAEKEQLSVQEAAKKSANPVSDVWMLITQNDYTFLEKEDGHHEMQNRFSFQP
VMPVPIMDGEWNLVNRLVANHYSSPGDRENGDFFEGRTNGMGDTVFLSMAAPNRDDGWIWGVGPTMIMPTGTDGLTQDKW
QVGPAAMVARLGKETGNPTSIESWNVGFLAQQWWDVGGSDSVTESTNQADIQYFLNYRVSNTALIGMTPNIQIDWTKDGS
DQFTVPVGLGYIDMFKVGPMPVRWGVELQYYVMKPDANVNTTNPAEYVPYAPDWNLKFFIAPVTLNPFK
>Mature_308_residues
TLGINMKNTKIISLLLSGAAIAYSGSALAEKEQLSVQEAAKKSANPVSDVWMLITQNDYTFLEKEDGHHEMQNRFSFQPV
MPVPIMDGEWNLVNRLVANHYSSPGDRENGDFFEGRTNGMGDTVFLSMAAPNRDDGWIWGVGPTMIMPTGTDGLTQDKWQ
VGPAAMVARLGKETGNPTSIESWNVGFLAQQWWDVGGSDSVTESTNQADIQYFLNYRVSNTALIGMTPNIQIDWTKDGSD
QFTVPVGLGYIDMFKVGPMPVRWGVELQYYVMKPDANVNTTNPAEYVPYAPDWNLKFFIAPVTLNPFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34326; Mature: 34195

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGINMKNTKIISLLLSGAAIAYSGSALAEKEQLSVQEAAKKSANPVSDVWMLITQNDY
CEEECCCCCHHEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCE
TFLEKEDGHHEMQNRFSFQPVMPVPIMDGEWNLVNRLVANHYSSPGDRENGDFFEGRTNG
EEEECCCCHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCC
MGDTVFLSMAAPNRDDGWIWGVGPTMIMPTGTDGLTQDKWQVGPAAMVARLGKETGNPTS
CCCEEEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
IESWNVGFLAQQWWDVGGSDSVTESTNQADIQYFLNYRVSNTALIGMTPNIQIDWTKDGS
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCEEEEEECCCC
DQFTVPVGLGYIDMFKVGPMPVRWGVELQYYVMKPDANVNTTNPAEYVPYAPDWNLKFFI
CEEEEEEECCEEEEEECCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
APVTLNPFK
EEEEECCCC
>Mature Secondary Structure 
TLGINMKNTKIISLLLSGAAIAYSGSALAEKEQLSVQEAAKKSANPVSDVWMLITQNDY
EEECCCCCHHEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCE
TFLEKEDGHHEMQNRFSFQPVMPVPIMDGEWNLVNRLVANHYSSPGDRENGDFFEGRTNG
EEEECCCCHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCC
MGDTVFLSMAAPNRDDGWIWGVGPTMIMPTGTDGLTQDKWQVGPAAMVARLGKETGNPTS
CCCEEEEEEECCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
IESWNVGFLAQQWWDVGGSDSVTESTNQADIQYFLNYRVSNTALIGMTPNIQIDWTKDGS
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCEEEEEECCCEEEEEECCCC
DQFTVPVGLGYIDMFKVGPMPVRWGVELQYYVMKPDANVNTTNPAEYVPYAPDWNLKFFI
CEEEEEEECCEEEEEECCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
APVTLNPFK
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA