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The map label for this gene is slyA [C]

Identifier: 218710072

GI number: 218710072

Start: 2246273

End: 2246701

Strand: Direct

Name: slyA [C]

Synonym: VS_2093

Alternate gene names: 218710072

Gene position: 2246273-2246701 (Clockwise)

Preceding gene: 218710071

Following gene: 218710077

Centisome position: 68.08

GC content: 42.66

Gene sequence:

>429_bases
ATGTCACAAGAATTTGATAGACAAAATAGCTTTGGTTGGATGATCAACGTGATCGCCAATAAAGCGAGCAAAGACTTCGA
CACAGAATTGAAAGAACATGGCTTAACCATTGCGCTCTGGCCAACCTTGATGTGCCTATGGGAAGAGGAAGGTATTACTC
AGCGTGATATCGCGGCAAAGTCCAAAGTCGAGAATTCGACAACGACACGAACATTAGACAAGTTAGAAAAGCTTAAACTG
GTTGAACGCAGAGCCGATCCAAACAGTCGTCGTTCTTTCAGAATCTACTTAACGGAAAAAGGGAAAGCACTCGAAGAACA
ACTCGTTCCAATCCCTATTCGTTTAAACAAAGAGCTAATGAACGAGTTGGACGCTAAAGAACAACAGCAGATGATAAAGC
TACTTCAAAAGATGGTCGCAGCGATCTGA

Upstream 100 bases:

>100_bases
CTTTTTTATCAAATAACGAAGCAATGTTGGTGCTAATTGCATCGGTATTAGTTACGATGACAATAGTTGTAATGTCATCA
TAAGAATTAGGTACTGACGA

Downstream 100 bases:

>100_bases
TCTTACTGTGACCGGAGCTTACTGTTAGTACATGCTTAATGAGTTCTAAACTTGCACGAACCAACAACCAATACTCGGCC
TTGCGCCGAGTGTTTTATTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family Protein; Regulatory Protein MarR; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSQEFDRQNSFGWMINVIANKASKDFDTELKEHGLTIALWPTLMCLWEEEGITQRDIAAKSKVENSTTTRTLDKLEKLKL
VERRADPNSRRSFRIYLTEKGKALEEQLVPIPIRLNKELMNELDAKEQQQMIKLLQKMVAAI

Sequences:

>Translated_142_residues
MSQEFDRQNSFGWMINVIANKASKDFDTELKEHGLTIALWPTLMCLWEEEGITQRDIAAKSKVENSTTTRTLDKLEKLKL
VERRADPNSRRSFRIYLTEKGKALEEQLVPIPIRLNKELMNELDAKEQQQMIKLLQKMVAAI
>Mature_141_residues
SQEFDRQNSFGWMINVIANKASKDFDTELKEHGLTIALWPTLMCLWEEEGITQRDIAAKSKVENSTTTRTLDKLEKLKLV
ERRADPNSRRSFRIYLTEKGKALEEQLVPIPIRLNKELMNELDAKEQQQMIKLLQKMVAAI

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16520; Mature: 16389

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEFDRQNSFGWMINVIANKASKDFDTELKEHGLTIALWPTLMCLWEEEGITQRDIAAK
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHHH
SKVENSTTTRTLDKLEKLKLVERRADPNSRRSFRIYLTEKGKALEEQLVPIPIRLNKELM
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCCCEEECHHHH
NELDAKEQQQMIKLLQKMVAAI
HHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQEFDRQNSFGWMINVIANKASKDFDTELKEHGLTIALWPTLMCLWEEEGITQRDIAAK
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHHH
SKVENSTTTRTLDKLEKLKLVERRADPNSRRSFRIYLTEKGKALEEQLVPIPIRLNKELM
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHCCCCCCEEECHHHH
NELDAKEQQQMIKLLQKMVAAI
HHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA