Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is yjcK [H]

Identifier: 218710051

GI number: 218710051

Start: 2224411

End: 2224956

Strand: Direct

Name: yjcK [H]

Synonym: VS_2071

Alternate gene names: 218710051

Gene position: 2224411-2224956 (Clockwise)

Preceding gene: 218710050

Following gene: 218710060

Centisome position: 67.42

GC content: 44.87

Gene sequence:

>546_bases
ATGAGCCCTGACTTTCAGATAAATACTCAACACCTCAACCTAAAAATCATTGAAGCCTCAGACGCTCAAGAGTTTTCGCA
GCTGGTTAAATCCTCCCCGAGTTTATTGCCATGGCTCGACTGGTGCCACGACGAGTTTTCGACCGTCGAGGCCGAGAGAT
TCATTCTTGCGACTCGCTTAAACTGGGTTAAAGCCGATGCGTTTGGCTTTGGTATCTTCGAACGAAAAAGCGAAAAGTTA
GTCGGCATGGTGGCCATAAATGAGCTTTACCACACCTTTAATATGGCCAGTTTAGGTTATTGGGTGGGTGATCAATTTCA
GAGAAAAGGGATAGCGAAAGAAGCAATGCTTGCCCTATTTGAATTTTGCTTCGCAATGCTCAAGTTGACGCGTTTGGAGA
TTGTCTGCGATACAGAGAACCTACCCAGCCAAAAGCTGATCGAGAAATGTGGCGCTGAACGTGAAGCCATTGCAAAGAAT
CGCTTTATCTTTAACGGTAAACCGAAAGATGGCGTGGTTTATTCTGTGTTACCTCCATTATCTTAA

Upstream 100 bases:

>100_bases
TCAATCCGCCCTCCTAGTGAGGGCGTTTTATTAAGTGCTATCTATCTTTATTCTGCACTGAATCCTTTGTTCAGTACTTA
CATGTAATTCGGTATTTCTT

Downstream 100 bases:

>100_bases
TCGCTTAATAGAGTAACAATCCGAAATAACACGTACTCGACACGATCAAAAAAGAGCTCCGAAGAGCTCTTTTTTATTAT
CAGCGTAATGACCTTAGAAG

Product: putative ribosomal-protein-serine acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSPDFQINTQHLNLKIIEASDAQEFSQLVKSSPSLLPWLDWCHDEFSTVEAERFILATRLNWVKADAFGFGIFERKSEKL
VGMVAINELYHTFNMASLGYWVGDQFQRKGIAKEAMLALFEFCFAMLKLTRLEIVCDTENLPSQKLIEKCGAEREAIAKN
RFIFNGKPKDGVVYSVLPPLS

Sequences:

>Translated_181_residues
MSPDFQINTQHLNLKIIEASDAQEFSQLVKSSPSLLPWLDWCHDEFSTVEAERFILATRLNWVKADAFGFGIFERKSEKL
VGMVAINELYHTFNMASLGYWVGDQFQRKGIAKEAMLALFEFCFAMLKLTRLEIVCDTENLPSQKLIEKCGAEREAIAKN
RFIFNGKPKDGVVYSVLPPLS
>Mature_180_residues
SPDFQINTQHLNLKIIEASDAQEFSQLVKSSPSLLPWLDWCHDEFSTVEAERFILATRLNWVKADAFGFGIFERKSEKLV
GMVAINELYHTFNMASLGYWVGDQFQRKGIAKEAMLALFEFCFAMLKLTRLEIVCDTENLPSQKLIEKCGAEREAIAKNR
FIFNGKPKDGVVYSVLPPLS

Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5 [H]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: =2.3.1.128 [H]

Molecular weight: Translated: 20630; Mature: 20499

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPDFQINTQHLNLKIIEASDAQEFSQLVKSSPSLLPWLDWCHDEFSTVEAERFILATRL
CCCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NWVKADAFGFGIFERKSEKLVGMVAINELYHTFNMASLGYWVGDQFQRKGIAKEAMLALF
CCEEHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHH
EFCFAMLKLTRLEIVCDTENLPSQKLIEKCGAEREAIAKNRFIFNGKPKDGVVYSVLPPL
HHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCHHHHHHHCCEEECCCCCCCEEEEECCCC
S
C
>Mature Secondary Structure 
SPDFQINTQHLNLKIIEASDAQEFSQLVKSSPSLLPWLDWCHDEFSTVEAERFILATRL
CCCCEEEEEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NWVKADAFGFGIFERKSEKLVGMVAINELYHTFNMASLGYWVGDQFQRKGIAKEAMLALF
CCEEHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHH
EFCFAMLKLTRLEIVCDTENLPSQKLIEKCGAEREAIAKNRFIFNGKPKDGVVYSVLPPL
HHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCHHHHHHHCCEEECCCCCCCEEEEECCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]