| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710050
Identifier: 218710050
GI number: 218710050
Start: 2223507
End: 2224274
Strand: Direct
Name: 218710050
Synonym: VS_2070
Alternate gene names: NA
Gene position: 2223507-2224274 (Clockwise)
Preceding gene: 218710049
Following gene: 218710051
Centisome position: 67.39
GC content: 45.57
Gene sequence:
>768_bases ATGAAAAGACTGATCCCACTGCTACTATTGTTCGTCTCACTGCCAAGTTTGGCGCAGAGACAATTTGATATAGAAGTGAT CATTTTTAAGCGTGCTGTTGATGCAGAAAAAGTGAATGAATCTTGGCCAAACACACAGCCTCAGATTTCACTTGAGCGCG TAGGTTCATTTCAAGATACCCAATACCGAGCGAAGAAAGGCGTGCAGATGCTGCCTTACTCGGAATACAAGTTAACACCT CAGAAAGACAAGCTACGCAAACACGCAGGCTTTGAAGTTCTGATGCATACCGCTTGGCGTCAAGGCGACCAAGGCAAAAG CTCGGCACCAGTTTTCCACATTCAAGCCGGTAAAGACTTCTCCAAACAGTTTAATGCCGACGGTTCTGAGAAAGGTGTAG TAACAGCAGTAAATACTGATGGTTTTCAAGAAGAGACTATCGATAAGCCGCTTTACGAGTTAGACGGCAAGCTGCAAATC TACGTTCAGCACTATCTATACGCTGAAACGACATTGGATTTGAAAGCGCCGAGCGTTCGTGAAGTGACTCTACAAGAGCA ACAAATCGAGCTAGATTCACCTGTAAGTGGTGCAGAAAGTAACGTGCAAGTGGGTAATCTAACGGAGATTTCTCCGACGG TTGAAGTCCAAGAGTTTCTTAAGAGCTACCGCATGGACCAAAAACGTCGTATGCGCAGTACAGAAACTCACTACCTTGAC CACCCACTTCTTGGAATGGTTATTCAAGTTCGACGCGTGGCGCAGTAA
Upstream 100 bases:
>100_bases GGGTGAATTCAGACAGAACTTGCTGCCTTCGGCATAAGACCCAATCCACTTGCACATATAAATTATCCAGCCGGTAGTTC GGCTGGAAGACGGAGTAAAA
Downstream 100 bases:
>100_bases GTTACTTGCCGATTCGGCTATAATTATATAAGTAATTCAATCCGCCCTCCTAGTGAGGGCGTTTTATTAAGTGCTATCTA TCTTTATTCTGCACTGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKRLIPLLLLFVSLPSLAQRQFDIEVIIFKRAVDAEKVNESWPNTQPQISLERVGSFQDTQYRAKKGVQMLPYSEYKLTP QKDKLRKHAGFEVLMHTAWRQGDQGKSSAPVFHIQAGKDFSKQFNADGSEKGVVTAVNTDGFQEETIDKPLYELDGKLQI YVQHYLYAETTLDLKAPSVREVTLQEQQIELDSPVSGAESNVQVGNLTEISPTVEVQEFLKSYRMDQKRRMRSTETHYLD HPLLGMVIQVRRVAQ
Sequences:
>Translated_255_residues MKRLIPLLLLFVSLPSLAQRQFDIEVIIFKRAVDAEKVNESWPNTQPQISLERVGSFQDTQYRAKKGVQMLPYSEYKLTP QKDKLRKHAGFEVLMHTAWRQGDQGKSSAPVFHIQAGKDFSKQFNADGSEKGVVTAVNTDGFQEETIDKPLYELDGKLQI YVQHYLYAETTLDLKAPSVREVTLQEQQIELDSPVSGAESNVQVGNLTEISPTVEVQEFLKSYRMDQKRRMRSTETHYLD HPLLGMVIQVRRVAQ >Mature_255_residues MKRLIPLLLLFVSLPSLAQRQFDIEVIIFKRAVDAEKVNESWPNTQPQISLERVGSFQDTQYRAKKGVQMLPYSEYKLTP QKDKLRKHAGFEVLMHTAWRQGDQGKSSAPVFHIQAGKDFSKQFNADGSEKGVVTAVNTDGFQEETIDKPLYELDGKLQI YVQHYLYAETTLDLKAPSVREVTLQEQQIELDSPVSGAESNVQVGNLTEISPTVEVQEFLKSYRMDQKRRMRSTETHYLD HPLLGMVIQVRRVAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29184; Mature: 29184
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLIPLLLLFVSLPSLAQRQFDIEVIIFKRAVDAEKVNESWPNTQPQISLERVGSFQDT CHHHHHHHHHHHCCCHHHHHHCCEEEEEEECCCCHHHHHHCCCCCCCCEEHHHCCCCCHH QYRAKKGVQMLPYSEYKLTPQKDKLRKHAGFEVLMHTAWRQGDQGKSSAPVFHIQAGKDF HHHHHCCCEECCCCCEECCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCH SKQFNADGSEKGVVTAVNTDGFQEETIDKPLYELDGKLQIYVQHYLYAETTLDLKAPSVR HHHCCCCCCCCCEEEEECCCCCCHHHHCCCHHHHCCCEEEEEEEEHHHHEEEECCCCCCC EVTLQEQQIELDSPVSGAESNVQVGNLTEISPTVEVQEFLKSYRMDQKRRMRSTETHYLD EEHHHHHHCCCCCCCCCCCCCEEECCEECCCCCHHHHHHHHHHCCCHHHHHHHCCHHHCC HPLLGMVIQVRRVAQ CHHHHHHHHHHHHCC >Mature Secondary Structure MKRLIPLLLLFVSLPSLAQRQFDIEVIIFKRAVDAEKVNESWPNTQPQISLERVGSFQDT CHHHHHHHHHHHCCCHHHHHHCCEEEEEEECCCCHHHHHHCCCCCCCCEEHHHCCCCCHH QYRAKKGVQMLPYSEYKLTPQKDKLRKHAGFEVLMHTAWRQGDQGKSSAPVFHIQAGKDF HHHHHCCCEECCCCCEECCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCH SKQFNADGSEKGVVTAVNTDGFQEETIDKPLYELDGKLQIYVQHYLYAETTLDLKAPSVR HHHCCCCCCCCCEEEEECCCCCCHHHHCCCHHHHCCCEEEEEEEEHHHHEEEECCCCCCC EVTLQEQQIELDSPVSGAESNVQVGNLTEISPTVEVQEFLKSYRMDQKRRMRSTETHYLD EEHHHHHHCCCCCCCCCCCCCEEECCEECCCCCHHHHHHHHHHCCCHHHHHHHCCHHHCC HPLLGMVIQVRRVAQ CHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA