Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710029

Identifier: 218710029

GI number: 218710029

Start: 2199279

End: 2200481

Strand: Reverse

Name: 218710029

Synonym: VS_2049

Alternate gene names: NA

Gene position: 2200481-2199279 (Counterclockwise)

Preceding gene: 218710030

Following gene: 218710027

Centisome position: 66.7

GC content: 43.81

Gene sequence:

>1203_bases
ATGCATTCACGATTCAAAATACTCGATTCATTTTTGCTAGAGCACCAGATTTACTGGCGTTCAGAGCCTTTTCACCTATG
CCAAACTCACGATCAGCCATGGACAGACGTGAACCTTCCACTTGTCGATTGGTTAGATGGTTTGAGTATTGAACGCATTC
AAACGCTAAAAGAACAGCCTCAAGTTCTGATTTCGGAACTTATGCGTTTTCTCCCAGAGTTAGGGAATGCCAATCAACAC
ATCCAGTTTGATAATTCGGCTTTAGTTGGGCTTGATCTTCCGCGCGGTACTGCCGATGGTATCCCCGGCAGAAAGCTGCA
ACAAATTGTCGCGATGGGAGAGGCTTCATTAAAAGAGCATCATGGTAAAGAGTGGCTTGAATGGTGTTCTGGCAAAGGCT
TTCTCGGTCGAATCTTATCTCAGCAATCAGATCAAAAGGTCACTAGCTTTGAGTGGCAACAGTCACTGTGTGAAAGCGGG
CAAAAGATTGCAGATGACCAGAAACTAGAGATGGACTTTGTTCAAGGTGACGCGTTTTCAAAAGATGCAGATCGGGTGTT
TAACTCAAACCAACATGCTGTTGCTCTTCATGCTTGTGGTGACCTTCATGTCGAATTAGTGAAAAAATCTGTTTCACATG
GGCTTCCTGCAGTCACCATTTCTCCATGTTGCTACCACCTTATTCGCGATGAAAGCTACCAAGCGATGTCATCCGTTGCG
AAAAGCTCAGCATTAACGTTGAGCAAGAGCGACTTAAGAATCCCGCTTCAAGAAACTGTCACTGGTGGTGAAAGAGTAAA
AAGACACCGTCAGTTAGAAATGAGTTACCGATTAGGCTTTAGCCAACTACTTAAGGGTGAGCTTGGTGTCGACGAGTACA
TTCCTGTACCAAGCATCAAGAAATCGGAGCTATCCGCAGGCTTTGAATCATTTTGTTGCTGGGCATCTGAAGTGAAAGAT
ATATCGCTGGGTTCAGATATTGATTTTGACTCTTATTTAATTCAAGGCGAAGCGCTTTTCTGGGAAATGGAAAAGCTGAG
TTTAGTTCAACAAGTCTTTAGAAGACCTTTAGAGATATGGTTGGCCTTAGATCGTGCCATTTATCTGCAAGAACAAGGTT
ATCAAGCTTCGATTGAAGAGTTCTGCGAACGTAGTGTAACGCCAAGAAACCTATTGATTCATGGGGTTAAGATCGAGCGC
TAG

Upstream 100 bases:

>100_bases
GTTTTATTGCTGGTAGGTTGTCTTTATACAACCTCAATTTGTAACCTTCCTTTCCATTTAGGCCTCTTACCCCTACAATC
ATCGCACCATAGGGGGAAGC

Downstream 100 bases:

>100_bases
CGGTAAACAGCACTGGTATGTGTTTTTACGATCTAAAATCATGAATGCAAAATAAAGCTATAAATACAAAAAAGTGATAA
ATACAAAAAAAGCCAGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQPQVLISELMRFLPELGNANQH
IQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEHHGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESG
QKIADDQKLEMDFVQGDAFSKDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA
KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIKKSELSAGFESFCCWASEVKD
ISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIWLALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER

Sequences:

>Translated_400_residues
MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQPQVLISELMRFLPELGNANQH
IQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEHHGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESG
QKIADDQKLEMDFVQGDAFSKDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA
KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIKKSELSAGFESFCCWASEVKD
ISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIWLALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER
>Mature_400_residues
MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQPQVLISELMRFLPELGNANQH
IQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEHHGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESG
QKIADDQKLEMDFVQGDAFSKDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA
KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIKKSELSAGFESFCCWASEVKD
ISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIWLALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45518; Mature: 45518

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQP
CCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCH
QVLISELMRFLPELGNANQHIQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEH
HHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
HGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESGQKIADDQKLEMDFVQGDAFS
CCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCC
KDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA
CHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHH
KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIK
HHHHEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
KSELSAGFESFCCWASEVKDISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIW
HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER
HHHHHHHEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECC
>Mature Secondary Structure
MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQP
CCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCH
QVLISELMRFLPELGNANQHIQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEH
HHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
HGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESGQKIADDQKLEMDFVQGDAFS
CCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCC
KDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA
CHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHH
KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIK
HHHHEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
KSELSAGFESFCCWASEVKDISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIW
HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER
HHHHHHHEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA