| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218710029
Identifier: 218710029
GI number: 218710029
Start: 2199279
End: 2200481
Strand: Reverse
Name: 218710029
Synonym: VS_2049
Alternate gene names: NA
Gene position: 2200481-2199279 (Counterclockwise)
Preceding gene: 218710030
Following gene: 218710027
Centisome position: 66.7
GC content: 43.81
Gene sequence:
>1203_bases ATGCATTCACGATTCAAAATACTCGATTCATTTTTGCTAGAGCACCAGATTTACTGGCGTTCAGAGCCTTTTCACCTATG CCAAACTCACGATCAGCCATGGACAGACGTGAACCTTCCACTTGTCGATTGGTTAGATGGTTTGAGTATTGAACGCATTC AAACGCTAAAAGAACAGCCTCAAGTTCTGATTTCGGAACTTATGCGTTTTCTCCCAGAGTTAGGGAATGCCAATCAACAC ATCCAGTTTGATAATTCGGCTTTAGTTGGGCTTGATCTTCCGCGCGGTACTGCCGATGGTATCCCCGGCAGAAAGCTGCA ACAAATTGTCGCGATGGGAGAGGCTTCATTAAAAGAGCATCATGGTAAAGAGTGGCTTGAATGGTGTTCTGGCAAAGGCT TTCTCGGTCGAATCTTATCTCAGCAATCAGATCAAAAGGTCACTAGCTTTGAGTGGCAACAGTCACTGTGTGAAAGCGGG CAAAAGATTGCAGATGACCAGAAACTAGAGATGGACTTTGTTCAAGGTGACGCGTTTTCAAAAGATGCAGATCGGGTGTT TAACTCAAACCAACATGCTGTTGCTCTTCATGCTTGTGGTGACCTTCATGTCGAATTAGTGAAAAAATCTGTTTCACATG GGCTTCCTGCAGTCACCATTTCTCCATGTTGCTACCACCTTATTCGCGATGAAAGCTACCAAGCGATGTCATCCGTTGCG AAAAGCTCAGCATTAACGTTGAGCAAGAGCGACTTAAGAATCCCGCTTCAAGAAACTGTCACTGGTGGTGAAAGAGTAAA AAGACACCGTCAGTTAGAAATGAGTTACCGATTAGGCTTTAGCCAACTACTTAAGGGTGAGCTTGGTGTCGACGAGTACA TTCCTGTACCAAGCATCAAGAAATCGGAGCTATCCGCAGGCTTTGAATCATTTTGTTGCTGGGCATCTGAAGTGAAAGAT ATATCGCTGGGTTCAGATATTGATTTTGACTCTTATTTAATTCAAGGCGAAGCGCTTTTCTGGGAAATGGAAAAGCTGAG TTTAGTTCAACAAGTCTTTAGAAGACCTTTAGAGATATGGTTGGCCTTAGATCGTGCCATTTATCTGCAAGAACAAGGTT ATCAAGCTTCGATTGAAGAGTTCTGCGAACGTAGTGTAACGCCAAGAAACCTATTGATTCATGGGGTTAAGATCGAGCGC TAG
Upstream 100 bases:
>100_bases GTTTTATTGCTGGTAGGTTGTCTTTATACAACCTCAATTTGTAACCTTCCTTTCCATTTAGGCCTCTTACCCCTACAATC ATCGCACCATAGGGGGAAGC
Downstream 100 bases:
>100_bases CGGTAAACAGCACTGGTATGTGTTTTTACGATCTAAAATCATGAATGCAAAATAAAGCTATAAATACAAAAAAGTGATAA ATACAAAAAAAGCCAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQPQVLISELMRFLPELGNANQH IQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEHHGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESG QKIADDQKLEMDFVQGDAFSKDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIKKSELSAGFESFCCWASEVKD ISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIWLALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER
Sequences:
>Translated_400_residues MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQPQVLISELMRFLPELGNANQH IQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEHHGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESG QKIADDQKLEMDFVQGDAFSKDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIKKSELSAGFESFCCWASEVKD ISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIWLALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER >Mature_400_residues MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQPQVLISELMRFLPELGNANQH IQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEHHGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESG QKIADDQKLEMDFVQGDAFSKDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIKKSELSAGFESFCCWASEVKD ISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIWLALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45518; Mature: 45518
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQP CCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCH QVLISELMRFLPELGNANQHIQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEH HHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH HGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESGQKIADDQKLEMDFVQGDAFS CCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCC KDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA CHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHH KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIK HHHHEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC KSELSAGFESFCCWASEVKDISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIW HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH LALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER HHHHHHHEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECC >Mature Secondary Structure MHSRFKILDSFLLEHQIYWRSEPFHLCQTHDQPWTDVNLPLVDWLDGLSIERIQTLKEQP CCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCH QVLISELMRFLPELGNANQHIQFDNSALVGLDLPRGTADGIPGRKLQQIVAMGEASLKEH HHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH HGKEWLEWCSGKGFLGRILSQQSDQKVTSFEWQQSLCESGQKIADDQKLEMDFVQGDAFS CCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCC KDADRVFNSNQHAVALHACGDLHVELVKKSVSHGLPAVTISPCCYHLIRDESYQAMSSVA CHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHH KSSALTLSKSDLRIPLQETVTGGERVKRHRQLEMSYRLGFSQLLKGELGVDEYIPVPSIK HHHHEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC KSELSAGFESFCCWASEVKDISLGSDIDFDSYLIQGEALFWEMEKLSLVQQVFRRPLEIW HHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH LALDRAIYLQEQGYQASIEEFCERSVTPRNLLIHGVKIER HHHHHHHEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA