Click here to switch to the map view.

The map label for this gene is 218709983

Identifier: 218709983

GI number: 218709983

Start: 2147965

End: 2149179

Strand: Direct

Name: 218709983

Synonym: VS_2002

Alternate gene names: NA

Gene position: 2147965-2149179 (Clockwise)

Preceding gene: 218709980

Following gene: 218709987

Centisome position: 65.1

GC content: 47.41

Gene sequence:

>1215_bases
ATGGATCGACTAATCTCTTTTTTGCCAAGCAGCAGCGCTGCGAAAACAACTCAGTTTTCACTGTCTTTTAAGCGCCTGCT
TTTACCTATTTCACTTGCGGCGTTAGTTGCAGCTCCTGCTACGCGAGAATTGACGGTCACTACCTTGTCTGACGCCTTCT
GGGCAGTGTCATGTTACGTTGCGCTAACCCTAGCGATTTACCACTGGTTAAGTCTATACATCAACAAAGATAACGTCTTC
AATAAGCTCGTCCATCAATCTCGTTCAAACCAAGTTGTATTCGCCGCGCTAATGGGCGCATTGCCAGGCTGTGGGGGAGC
GATTGTGGTCACCACACAATTTATTTCAGGCAAACTCGGATTTGGTGCGGTTGTGGCTGTACTCGTCTCAACCATGGGTG
ACGCGGCCTTCCTGTTAATTGCTAGCGAACCCAAAACAGGTTTAGCCATGATGGCGATGGGTGTAATCGTGGGTACCGCC
TCAGGACGAATCATAAACTTGTTTCACGCAGACGACTTTTTACGCCCGAAACAGGCAGAGAGAAATGAAGCGGAAAACAG
CTGTACCTCACAACCTCAAGGTCAAAGCCCTGTCTCTAAAAAAGCGATAAACCTTCAGGGTTACCTATGGTCTGTGCTTA
TTATTCCGGGAGCCGCTGTTGCCCTGCTTGGCTCTTTTCAAATCGATGTAAACCAGTTGCTGACACTGCCTGAGATGTCT
ATGGAATGGACGGGAACGATTTTACTGATCAGCTCGATGTTTTTGTGGGGGCTTACTCGTGAAATTGAGGATTACAAATC
GGCCGTAAGTGAAGATGAAAAATGTATAGGTTCTCACCCACTACAAAAAACAGCTCAAGATACAAACTTTGTCACTGCAT
GGGTGGTGGTGGCTTTTCTTTTCTTCGAGTTTGGCTCTGTGCTTGCAAATGTCGATTTTGCGACGCTATTCTCAAGCTGG
GGGATGATGCTCCCCCTGGCGGGTGTGTTGATGGGCTTACTGCCGGGGTGTGGTCCACAATTGTTGGTCACTAGCCTTTA
CCTTTCAGGTGCACTGCCACTTTCAGCTCAGGTCGGTAACGCAATTTCAAATGATGGTGATGCTTTATTCCCTGCTATCG
CAATGGCACCGAAAGCGGCTCTTGTGGCCACATTATATTCAGGCATACCCGCATTAATCTGTGCATACGGTTATTGGTTT
ATGTTCGAAATTTAA

Upstream 100 bases:

>100_bases
TTGGCCAATGGTAACAAAAGATAAAAAAACAACGAATGCAATTGATAATTATTATCATTCGTATATGATTGTCTTAATAC
ACAAATTTTGAGTGACACTT

Downstream 100 bases:

>100_bases
CTCAAGCTGATTCAATTCCATAGGTCTCTATTAGGTCGATACTTTGTATCGGCCTTTTTGTTTCCGTCTGCCTAAGTCCT
TACAGCAGATTCTTTTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MDRLISFLPSSSAAKTTQFSLSFKRLLLPISLAALVAAPATRELTVTTLSDAFWAVSCYVALTLAIYHWLSLYINKDNVF
NKLVHQSRSNQVVFAALMGALPGCGGAIVVTTQFISGKLGFGAVVAVLVSTMGDAAFLLIASEPKTGLAMMAMGVIVGTA
SGRIINLFHADDFLRPKQAERNEAENSCTSQPQGQSPVSKKAINLQGYLWSVLIIPGAAVALLGSFQIDVNQLLTLPEMS
MEWTGTILLISSMFLWGLTREIEDYKSAVSEDEKCIGSHPLQKTAQDTNFVTAWVVVAFLFFEFGSVLANVDFATLFSSW
GMMLPLAGVLMGLLPGCGPQLLVTSLYLSGALPLSAQVGNAISNDGDALFPAIAMAPKAALVATLYSGIPALICAYGYWF
MFEI

Sequences:

>Translated_404_residues
MDRLISFLPSSSAAKTTQFSLSFKRLLLPISLAALVAAPATRELTVTTLSDAFWAVSCYVALTLAIYHWLSLYINKDNVF
NKLVHQSRSNQVVFAALMGALPGCGGAIVVTTQFISGKLGFGAVVAVLVSTMGDAAFLLIASEPKTGLAMMAMGVIVGTA
SGRIINLFHADDFLRPKQAERNEAENSCTSQPQGQSPVSKKAINLQGYLWSVLIIPGAAVALLGSFQIDVNQLLTLPEMS
MEWTGTILLISSMFLWGLTREIEDYKSAVSEDEKCIGSHPLQKTAQDTNFVTAWVVVAFLFFEFGSVLANVDFATLFSSW
GMMLPLAGVLMGLLPGCGPQLLVTSLYLSGALPLSAQVGNAISNDGDALFPAIAMAPKAALVATLYSGIPALICAYGYWF
MFEI
>Mature_404_residues
MDRLISFLPSSSAAKTTQFSLSFKRLLLPISLAALVAAPATRELTVTTLSDAFWAVSCYVALTLAIYHWLSLYINKDNVF
NKLVHQSRSNQVVFAALMGALPGCGGAIVVTTQFISGKLGFGAVVAVLVSTMGDAAFLLIASEPKTGLAMMAMGVIVGTA
SGRIINLFHADDFLRPKQAERNEAENSCTSQPQGQSPVSKKAINLQGYLWSVLIIPGAAVALLGSFQIDVNQLLTLPEMS
MEWTGTILLISSMFLWGLTREIEDYKSAVSEDEKCIGSHPLQKTAQDTNFVTAWVVVAFLFFEFGSVLANVDFATLFSSW
GMMLPLAGVLMGLLPGCGPQLLVTSLYLSGALPLSAQVGNAISNDGDALFPAIAMAPKAALVATLYSGIPALICAYGYWF
MFEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43164; Mature: 43164

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLISFLPSSSAAKTTQFSLSFKRLLLPISLAALVAAPATRELTVTTLSDAFWAVSCYV
CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH
ALTLAIYHWLSLYINKDNVFNKLVHQSRSNQVVFAALMGALPGCGGAIVVTTQFISGKLG
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEHHCCCCC
FGAVVAVLVSTMGDAAFLLIASEPKTGLAMMAMGVIVGTASGRIINLFHADDFLRPKQAE
HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHH
RNEAENSCTSQPQGQSPVSKKAINLQGYLWSVLIIPGAAVALLGSFQIDVNQLLTLPEMS
HHHHHHHCCCCCCCCCCHHHHHEEHHHHHHHHHHHCCHHHHHHHCCEECHHHHHCCCCCC
MEWTGTILLISSMFLWGLTREIEDYKSAVSEDEKCIGSHPLQKTAQDTNFVTAWVVVAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHH
FFEFGSVLANVDFATLFSSWGMMLPLAGVLMGLLPGCGPQLLVTSLYLSGALPLSAQVGN
HHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCC
AISNDGDALFPAIAMAPKAALVATLYSGIPALICAYGYWFMFEI
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEC
>Mature Secondary Structure
MDRLISFLPSSSAAKTTQFSLSFKRLLLPISLAALVAAPATRELTVTTLSDAFWAVSCYV
CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH
ALTLAIYHWLSLYINKDNVFNKLVHQSRSNQVVFAALMGALPGCGGAIVVTTQFISGKLG
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEEEHHCCCCC
FGAVVAVLVSTMGDAAFLLIASEPKTGLAMMAMGVIVGTASGRIINLFHADDFLRPKQAE
HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHH
RNEAENSCTSQPQGQSPVSKKAINLQGYLWSVLIIPGAAVALLGSFQIDVNQLLTLPEMS
HHHHHHHCCCCCCCCCCHHHHHEEHHHHHHHHHHHCCHHHHHHHCCEECHHHHHCCCCCC
MEWTGTILLISSMFLWGLTREIEDYKSAVSEDEKCIGSHPLQKTAQDTNFVTAWVVVAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHH
FFEFGSVLANVDFATLFSSWGMMLPLAGVLMGLLPGCGPQLLVTSLYLSGALPLSAQVGN
HHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHCC
AISNDGDALFPAIAMAPKAALVATLYSGIPALICAYGYWFMFEI
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA