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The map label for this gene is nrfG [H]

Identifier: 218709922

GI number: 218709922

Start: 2077902

End: 2078531

Strand: Reverse

Name: nrfG [H]

Synonym: VS_1935

Alternate gene names: 218709922

Gene position: 2078531-2077902 (Counterclockwise)

Preceding gene: 218709923

Following gene: 218709919

Centisome position: 63.0

GC content: 45.4

Gene sequence:

>630_bases
ATGGATATCTGGTTGTTGGTTGCGTTGGTACTAATGAGTCTGTTTTTGATTGTGGTCGTTATTGCCGCGAGCAATAATGG
CAGCCATCTAAAAGGCAATGTGGTGATTTCTCTTACTGCGGTGGCTTTGAGCGTGCTGGTTTGGTCTCAACTGAAACAAG
AGTTACCTCAACTTCCTTTGGATGATAGCAATAACTACACGGCAACAGATTTCGAAGATGAGCTTCAACAAAGCCTCAAA
CAAGACCCGAATCAATCCGACTTGTGGTTTAAGCTTGGTGGTGTGTACATGCAGAGAGGGGAGTTTGATGCGGCATTCAC
TTGCTACGACTACGCAATTCGATTAGATCCTCAAGCGCCTTCTGGCCTCTATGCTGCCAAAGCAACCGCACTTTATTATC
TGAGCTCTCAAGCGATGAGTGATGATGTTAATGCGCTGTTGGAGCACTCAATGCAGCTTGATCCCAATGATCGTACGGCA
TTGATGCTGATTGCGACCGATCACTTTATCAGCATGCGCTATCAACAAGCGATCGATGCGTGGACTCAAATCTTAGATTC
CAATCAGAAGGGCATTGATCGTGTCTCTATTATCCATTCGATCAACCAAGCCAAACAGATGATCCGTTAA

Upstream 100 bases:

>100_bases
AAAAGTTTGAGCACTAAATCTCGAACGCTAAACTTTGATCAATAACGAGGCAGGGCGAAAACGATAGAGTAGGGGCAGAT
CTAAATAAAAGGGATGCGGA

Downstream 100 bases:

>100_bases
GCTTGGCTAATTGCTAAAGAGGCGATCTTACTTAAGATCTCATTTCGAAGACTATTGGTTTTCCTGCATTTCGATTAAGC
CACCAGCATTGTGGATTTGA

Product: putative Cytochrome c biogenesis factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDIWLLVALVLMSLFLIVVVIAASNNGSHLKGNVVISLTAVALSVLVWSQLKQELPQLPLDDSNNYTATDFEDELQQSLK
QDPNQSDLWFKLGGVYMQRGEFDAAFTCYDYAIRLDPQAPSGLYAAKATALYYLSSQAMSDDVNALLEHSMQLDPNDRTA
LMLIATDHFISMRYQQAIDAWTQILDSNQKGIDRVSIIHSINQAKQMIR

Sequences:

>Translated_209_residues
MDIWLLVALVLMSLFLIVVVIAASNNGSHLKGNVVISLTAVALSVLVWSQLKQELPQLPLDDSNNYTATDFEDELQQSLK
QDPNQSDLWFKLGGVYMQRGEFDAAFTCYDYAIRLDPQAPSGLYAAKATALYYLSSQAMSDDVNALLEHSMQLDPNDRTA
LMLIATDHFISMRYQQAIDAWTQILDSNQKGIDRVSIIHSINQAKQMIR
>Mature_209_residues
MDIWLLVALVLMSLFLIVVVIAASNNGSHLKGNVVISLTAVALSVLVWSQLKQELPQLPLDDSNNYTATDFEDELQQSLK
QDPNQSDLWFKLGGVYMQRGEFDAAFTCYDYAIRLDPQAPSGLYAAKATALYYLSSQAMSDDVNALLEHSMQLDPNDRTA
LMLIATDHFISMRYQQAIDAWTQILDSNQKGIDRVSIIHSINQAKQMIR

Specific function: Required for formate-dependent nitrite reduction. Not required for the biosynthesis of any of the c-type cytochromes nor for the secretion of the periplasmic cytochromes [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1790513, Length=135, Percent_Identity=36.2962962962963, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23416; Mature: 23416

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIWLLVALVLMSLFLIVVVIAASNNGSHLKGNVVISLTAVALSVLVWSQLKQELPQLPL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHCCCCCC
DDSNNYTATDFEDELQQSLKQDPNQSDLWFKLGGVYMQRGEFDAAFTCYDYAIRLDPQAP
CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCEEEEEEEEEEECCCCC
SGLYAAKATALYYLSSQAMSDDVNALLEHSMQLDPNDRTALMLIATDHFISMRYQQAIDA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHH
WTQILDSNQKGIDRVSIIHSINQAKQMIR
HHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIWLLVALVLMSLFLIVVVIAASNNGSHLKGNVVISLTAVALSVLVWSQLKQELPQLPL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEHHHHHHHHHHHHHHHHHCCCCCC
DDSNNYTATDFEDELQQSLKQDPNQSDLWFKLGGVYMQRGEFDAAFTCYDYAIRLDPQAP
CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCEEEECCCCCCEEEEEEEEEEECCCCC
SGLYAAKATALYYLSSQAMSDDVNALLEHSMQLDPNDRTALMLIATDHFISMRYQQAIDA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHH
WTQILDSNQKGIDRVSIIHSINQAKQMIR
HHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]