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The map label for this gene is ycgF [C]

Identifier: 218709883

GI number: 218709883

Start: 2037426

End: 2037845

Strand: Direct

Name: ycgF [C]

Synonym: VS_1896

Alternate gene names: 218709883

Gene position: 2037426-2037845 (Clockwise)

Preceding gene: 218709882

Following gene: 218709888

Centisome position: 61.75

GC content: 41.43

Gene sequence:

>420_bases
ATGTTCCTAACTCGGTTAATTTATGTCAGTACACTTTCCGAATGTTGTGATTCCAAAGCACTGGATGAAATACTCACTAT
CTCACGAGACCACAACCGGCAGAGCCATCTAACAGGGCTTCTCAGTCATAACCAAAAGTACTTTCTTCAATGCATTGAAG
GCTCTAGGGAGGCGGTAAACCATACCTACAATCACATCCTAAACGATAAGCGGCACGAGAGAGTGACCATACTGTATTTT
AAGGAAGTTGATTGTCGAGAGTTTGGAGATTGGTCGATGGGAGACATTCCGCAGTCTAATTTGACTGAACTGTTGAACTT
ACAATTTTCGACTTCGGATCAATTTAACCCATACGAAATGTCTGGCGAAGGTGCTTATAAAATGCTTTTAGAGTTAAAGC
AAAATTTGCCGTCTGAGTGA

Upstream 100 bases:

>100_bases
CCGAAAGCCCCCGAGTGACAATTAGGTCAATAACTCGCAATTCCATGAGCTTGGCTTATATTTATTAATACCCTTTGAAC
AAAAATTCGAAATGATGCCT

Downstream 100 bases:

>100_bases
CCTAATTTTCAAACGGCTGGCCTTAGAACGATGATGTCGATTCAGGGGTAAGTAATCCTCTTTCAAGCCCGAGTTCATAC
TCGGGCTATTTGTTCAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: BLUF Domain Protein; Sensors Of Blue-Light Using FAD Family; Sensors Of Blue-Light Using FAD; Blue-Light Sensor BluF Domain; Bluf Domain Protein

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MFLTRLIYVSTLSECCDSKALDEILTISRDHNRQSHLTGLLSHNQKYFLQCIEGSREAVNHTYNHILNDKRHERVTILYF
KEVDCREFGDWSMGDIPQSNLTELLNLQFSTSDQFNPYEMSGEGAYKMLLELKQNLPSE

Sequences:

>Translated_139_residues
MFLTRLIYVSTLSECCDSKALDEILTISRDHNRQSHLTGLLSHNQKYFLQCIEGSREAVNHTYNHILNDKRHERVTILYF
KEVDCREFGDWSMGDIPQSNLTELLNLQFSTSDQFNPYEMSGEGAYKMLLELKQNLPSE
>Mature_139_residues
MFLTRLIYVSTLSECCDSKALDEILTISRDHNRQSHLTGLLSHNQKYFLQCIEGSREAVNHTYNHILNDKRHERVTILYF
KEVDCREFGDWSMGDIPQSNLTELLNLQFSTSDQFNPYEMSGEGAYKMLLELKQNLPSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16209; Mature: 16209

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLTRLIYVSTLSECCDSKALDEILTISRDHNRQSHLTGLLSHNQKYFLQCIEGSREAVN
CHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHH
HTYNHILNDKRHERVTILYFKEVDCREFGDWSMGDIPQSNLTELLNLQFSTSDQFNPYEM
HHHHHHHCCCCCCEEEEEEEECCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEE
SGEGAYKMLLELKQNLPSE
CCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFLTRLIYVSTLSECCDSKALDEILTISRDHNRQSHLTGLLSHNQKYFLQCIEGSREAVN
CHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHH
HTYNHILNDKRHERVTILYFKEVDCREFGDWSMGDIPQSNLTELLNLQFSTSDQFNPYEM
HHHHHHHCCCCCCEEEEEEEECCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEE
SGEGAYKMLLELKQNLPSE
CCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA