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The map label for this gene is sufA [H]

Identifier: 218709888

GI number: 218709888

Start: 2041902

End: 2042225

Strand: Direct

Name: sufA [H]

Synonym: VS_1901

Alternate gene names: 218709888

Gene position: 2041902-2042225 (Clockwise)

Preceding gene: 218709883

Following gene: 218709889

Centisome position: 61.89

GC content: 45.37

Gene sequence:

>324_bases
ATGGAGTGGCAAGGCGTCACGTTAAGTGAAAGTGCCGCAAACAGAATTTCCCAGTTATCACATGGGCAAAAGCACTTCCA
CCTCACGGTTAAGTCCTCTGGCTGTACGGGGTTTGCATATGAAGTGGCGCTGATCGATTCGCCATCCGATGACGACATCA
AGTACGAATCACATGACGTCATTTTCTATATTGCGCTCAAAGCCCTACCTATGATCGATGGCACAGAGATCGACTTTGTG
CGTCAGGGTTTAAACAGTAATTTTGTATACAATAATCCCAAAGTGAAGAACCTTTGTGGATGTGGCGAGAGTTTTGGAGT
TTAA

Upstream 100 bases:

>100_bases
ATGCAAATGATAATCAATATCATCTATTATCACCAGTCAAATATGGAGCAGTAAGGTGAGTATTTCGAGTTCCGGTTCTA
ATGACATATCCATACATGAT

Downstream 100 bases:

>100_bases
CCATGTGCGCATTAGAAACGCAGTCTGAAGCTAAAACGCTACTTGACGTTGAAACGCAAACAAAAATTGAAATGCGACCA
GACGCTGAAACGCGACCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MEWQGVTLSESAANRISQLSHGQKHFHLTVKSSGCTGFAYEVALIDSPSDDDIKYESHDVIFYIALKALPMIDGTEIDFV
RQGLNSNFVYNNPKVKNLCGCGESFGV

Sequences:

>Translated_107_residues
MEWQGVTLSESAANRISQLSHGQKHFHLTVKSSGCTGFAYEVALIDSPSDDDIKYESHDVIFYIALKALPMIDGTEIDFV
RQGLNSNFVYNNPKVKNLCGCGESFGV
>Mature_107_residues
MEWQGVTLSESAANRISQLSHGQKHFHLTVKSSGCTGFAYEVALIDSPSDDDIKYESHDVIFYIALKALPMIDGTEIDFV
RQGLNSNFVYNNPKVKNLCGCGESFGV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=36.7924528301887, Blast_Score=77, Evalue=3e-15,
Organism=Homo sapiens, GI160420328, Length=103, Percent_Identity=29.126213592233, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787974, Length=108, Percent_Identity=47.2222222222222, Blast_Score=110, Evalue=2e-26,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=45.7142857142857, Blast_Score=97, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=33.0188679245283, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=33.0188679245283, Blast_Score=66, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6323001, Length=104, Percent_Identity=36.5384615384615, Blast_Score=66, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=34.9056603773585, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870
- InterPro:   IPR011298 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 11803; Mature: 11803

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWQGVTLSESAANRISQLSHGQKHFHLTVKSSGCTGFAYEVALIDSPSDDDIKYESHDV
CCCCCCEECHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCE
IFYIALKALPMIDGTEIDFVRQGLNSNFVYNNPKVKNLCGCGESFGV
EEEEEEHHCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MEWQGVTLSESAANRISQLSHGQKHFHLTVKSSGCTGFAYEVALIDSPSDDDIKYESHDV
CCCCCCEECHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCE
IFYIALKALPMIDGTEIDFVRQGLNSNFVYNNPKVKNLCGCGESFGV
EEEEEEHHCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]