| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709881
Identifier: 218709881
GI number: 218709881
Start: 2036278
End: 2036526
Strand: Reverse
Name: 218709881
Synonym: VS_1894
Alternate gene names: NA
Gene position: 2036526-2036278 (Counterclockwise)
Preceding gene: 218709884
Following gene: 218709880
Centisome position: 61.73
GC content: 42.17
Gene sequence:
>249_bases ATGTTATCTAAAGAGACTGAATCAAGAATTATTGAAATGGCGTGGGAAGACAGAACGCCGTTTGAAGCAATAGAACTGCA ATTTGGTTTAAATGAATCAGAGGTGATTCGCTTGATGCGCAGTCGTTTGAAGCTTGGCAGTTTCAAGTTGTGGCGTACTC GCGTTTCTGGTCGCTCTACCAAGCACGTAAAACTTCGTAGCTCAGATGTATCTAGAGGTTATTGCCCTACTCAGTATAAG CATCGTTAA
Upstream 100 bases:
>100_bases TTTGGATGTTGGGGTTTTTCAATTTAAGCGATAAGTCTTTGATCTAATGAGCAAGAAGGAACGTATTTCTGTTCATTTAA TTGAAGATGAGTAGGCAAAG
Downstream 100 bases:
>100_bases ATTGATACTTACGTAGATTTGTAGCCTCAATGGATATCCCTGTATGGAAAAGAAAGGAATAAAAGGAATGAAAAAGTTTA TTACTCTATTTTTGGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MLSKETESRIIEMAWEDRTPFEAIELQFGLNESEVIRLMRSRLKLGSFKLWRTRVSGRSTKHVKLRSSDVSRGYCPTQYK HR
Sequences:
>Translated_82_residues MLSKETESRIIEMAWEDRTPFEAIELQFGLNESEVIRLMRSRLKLGSFKLWRTRVSGRSTKHVKLRSSDVSRGYCPTQYK HR >Mature_82_residues MLSKETESRIIEMAWEDRTPFEAIELQFGLNESEVIRLMRSRLKLGSFKLWRTRVSGRSTKHVKLRSSDVSRGYCPTQYK HR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9745; Mature: 9745
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKETESRIIEMAWEDRTPFEAIELQFGLNESEVIRLMRSRLKLGSFKLWRTRVSGRST CCCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHEEEEECCCCCC KHVKLRSSDVSRGYCPTQYKHR EEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MLSKETESRIIEMAWEDRTPFEAIELQFGLNESEVIRLMRSRLKLGSFKLWRTRVSGRST CCCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHEEEEECCCCCC KHVKLRSSDVSRGYCPTQYKHR EEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA