Click here to switch to the map view.

The map label for this gene is 218709869

Identifier: 218709869

GI number: 218709869

Start: 2027247

End: 2027909

Strand: Reverse

Name: 218709869

Synonym: VS_1882

Alternate gene names: NA

Gene position: 2027909-2027247 (Counterclockwise)

Preceding gene: 218709870

Following gene: 218709868

Centisome position: 61.46

GC content: 39.67

Gene sequence:

>663_bases
TTGGGCGTTAAGCAGCAAGTTTTATATTGGGATATCAAAATGAAAGATCCAAGATTTTATGTATATTTAATAGAATCACC
TTCGGCGCAAGATTTGCTAGAAAGTGCATTGGAGGGACGAACGCTTACAGAAGCGCTACATGTGTCAGGAATTGATTGTA
GTTACTATTTAGCAGCTAATTATCAAACTTTTGACCAAGCTTTAGGACAACGGCTCGAGAATACACTTTTTAGTGATGGT
CATAGGCGTCTACCAATTATTCATATTAGTGCTCATGGAAATCCTCAGGGGATGGCATTTACGGATGGGACATTTATAGC
GTGGGATGCGTTATATCACCGTTTATTAAACCTAAATGAACGGTTCAATGGTGGGCTTATTGTATCTGTTTCCGCTTGTT
TTGGCGCTTACGCGAACCAACTTTTAAAGCCAAACCAGCGCCCGCCATTTTTTGCTTTAGTTGGACCTACTAACTCTATA
GCTTTGAGTGATTTAGCCATAGGTTATGCCGCGTTTTATCACAATATTAAAAAGTTCTGGAATATTGAGTCAGCATTTAA
TGCTATGAAAATGGCTTCTGGAAATCATGAGTTTCAGATTACTTACGGCAATGCTCAGCAAAGCTACCAAACCGTTTTAC
AAGGAGCAACTTCTGCGTGGTAG

Upstream 100 bases:

>100_bases
ATTTAAGCAGTCTGTCAACGCTTAGCATTTTCAGTACGGTTTAGCTTCAGTGATATTGGTGGTAGATTTGAGTGTATTGG
TAGCGTTGTCAGCTACTTAA

Downstream 100 bases:

>100_bases
CTGCTTAACAAAGCGTTTAAGACAGATTCCCAACGCATGGCATTTTTGGTTCCATCGTTGGGTTTTGTGTTTACGGTGGT
ATGGTTAGGTTTCGTGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MGVKQQVLYWDIKMKDPRFYVYLIESPSAQDLLESALEGRTLTEALHVSGIDCSYYLAANYQTFDQALGQRLENTLFSDG
HRRLPIIHISAHGNPQGMAFTDGTFIAWDALYHRLLNLNERFNGGLIVSVSACFGAYANQLLKPNQRPPFFALVGPTNSI
ALSDLAIGYAAFYHNIKKFWNIESAFNAMKMASGNHEFQITYGNAQQSYQTVLQGATSAW

Sequences:

>Translated_220_residues
MGVKQQVLYWDIKMKDPRFYVYLIESPSAQDLLESALEGRTLTEALHVSGIDCSYYLAANYQTFDQALGQRLENTLFSDG
HRRLPIIHISAHGNPQGMAFTDGTFIAWDALYHRLLNLNERFNGGLIVSVSACFGAYANQLLKPNQRPPFFALVGPTNSI
ALSDLAIGYAAFYHNIKKFWNIESAFNAMKMASGNHEFQITYGNAQQSYQTVLQGATSAW
>Mature_219_residues
GVKQQVLYWDIKMKDPRFYVYLIESPSAQDLLESALEGRTLTEALHVSGIDCSYYLAANYQTFDQALGQRLENTLFSDGH
RRLPIIHISAHGNPQGMAFTDGTFIAWDALYHRLLNLNERFNGGLIVSVSACFGAYANQLLKPNQRPPFFALVGPTNSIA
LSDLAIGYAAFYHNIKKFWNIESAFNAMKMASGNHEFQITYGNAQQSYQTVLQGATSAW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24643; Mature: 24512

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVKQQVLYWDIKMKDPRFYVYLIESPSAQDLLESALEGRTLTEALHVSGIDCSYYLAAN
CCCCCEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEC
YQTFDQALGQRLENTLFSDGHRRLPIIHISAHGNPQGMAFTDGTFIAWDALYHRLLNLNE
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEECCCEEHHHHHHHHHHCCCC
RFNGGLIVSVSACFGAYANQLLKPNQRPPFFALVGPTNSIALSDLAIGYAAFYHNIKKFW
CCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHH
NIESAFNAMKMASGNHEFQITYGNAQQSYQTVLQGATSAW
CHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GVKQQVLYWDIKMKDPRFYVYLIESPSAQDLLESALEGRTLTEALHVSGIDCSYYLAAN
CCCCEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEC
YQTFDQALGQRLENTLFSDGHRRLPIIHISAHGNPQGMAFTDGTFIAWDALYHRLLNLNE
CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEECCCEEHHHHHHHHHHCCCC
RFNGGLIVSVSACFGAYANQLLKPNQRPPFFALVGPTNSIALSDLAIGYAAFYHNIKKFW
CCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHH
NIESAFNAMKMASGNHEFQITYGNAQQSYQTVLQGATSAW
CHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA