| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709868
Identifier: 218709868
GI number: 218709868
Start: 2026433
End: 2027101
Strand: Reverse
Name: 218709868
Synonym: VS_1881
Alternate gene names: NA
Gene position: 2027101-2026433 (Counterclockwise)
Preceding gene: 218709869
Following gene: 218709865
Centisome position: 61.44
GC content: 36.62
Gene sequence:
>669_bases GTGTTAATACACTTCACGAGAGAATTTGAAAACTTGGTATCAATACTTGAATCAAATTCGTTTTTGGTTCGATATTGCGG TGAGTATTTTGGAGACAACACAGGTAAAGTTATTTCTAGGGCTGCCCACCCTATGGTGTCATTTAGTGACTATAACCATG AAGAGCTAAGCACAAAAAAAGTGACTTATGGTGGTTACGGTGTTGCTTTACATAAGGCATGGGCAATAGAGAACAAACTA AGTCCGGTAAACTATGTAGAGAAAAATTCACCTGTCGCACAAGGATTAGTTTCTTTACTTCGAGCTCGTCAACGTGGAAA ACTGCCATCAAATTTAAGGTTGTCTGTCATTCAATTGAAGTGCTTCACTAAGCACGTGTATGGGTATAATAGTCACTTCC GTACCGATAACTTTGACTTTAAAGCAGAAAATGAATGGCGCTTTGTCCCTTCAGTAAAACAAATTGGTGGTAACAGAATA TCTGAGAATTATTCAACATATAAAAAATTCGAAGATAAATACAACCGCCGCCTAGAACCGTATGCTCTGAAGTTTGTTAA TAAAGACATAAAGTATGTTTACGTGCAAAATGAAGCAGAAAAAGAGCATTTAGTGAAATCATTAGGTCTGTTTTCTACTC AAGTAAAACTAGCTGAGTGGAAACAATAA
Upstream 100 bases:
>100_bases TTGGTTCCATCGTTGGGTTTTGTGTTTACGGTGGTATGGTTAGGTTTCGTGGTGGCGTTGCTCACTACTTAACGCGGCGT TATGTTTATGGAGACAATCG
Downstream 100 bases:
>100_bases ACATAACAAACTGTTTAAGAGTGATTCGCAACGCGTGGCATTTTTACCATGCGTTGGTTTTAGTGTTTAAGGTTGTTATG CGGCGGCATCGGCATTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MLIHFTREFENLVSILESNSFLVRYCGEYFGDNTGKVISRAAHPMVSFSDYNHEELSTKKVTYGGYGVALHKAWAIENKL SPVNYVEKNSPVAQGLVSLLRARQRGKLPSNLRLSVIQLKCFTKHVYGYNSHFRTDNFDFKAENEWRFVPSVKQIGGNRI SENYSTYKKFEDKYNRRLEPYALKFVNKDIKYVYVQNEAEKEHLVKSLGLFSTQVKLAEWKQ
Sequences:
>Translated_222_residues MLIHFTREFENLVSILESNSFLVRYCGEYFGDNTGKVISRAAHPMVSFSDYNHEELSTKKVTYGGYGVALHKAWAIENKL SPVNYVEKNSPVAQGLVSLLRARQRGKLPSNLRLSVIQLKCFTKHVYGYNSHFRTDNFDFKAENEWRFVPSVKQIGGNRI SENYSTYKKFEDKYNRRLEPYALKFVNKDIKYVYVQNEAEKEHLVKSLGLFSTQVKLAEWKQ >Mature_222_residues MLIHFTREFENLVSILESNSFLVRYCGEYFGDNTGKVISRAAHPMVSFSDYNHEELSTKKVTYGGYGVALHKAWAIENKL SPVNYVEKNSPVAQGLVSLLRARQRGKLPSNLRLSVIQLKCFTKHVYGYNSHFRTDNFDFKAENEWRFVPSVKQIGGNRI SENYSTYKKFEDKYNRRLEPYALKFVNKDIKYVYVQNEAEKEHLVKSLGLFSTQVKLAEWKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25855; Mature: 25855
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIHFTREFENLVSILESNSFLVRYCGEYFGDNTGKVISRAAHPMVSFSDYNHEELSTKK CEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCHHHCCCE VTYGGYGVALHKAWAIENKLSPVNYVEKNSPVAQGLVSLLRARQRGKLPSNLRLSVIQLK EEECCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHH CFTKHVYGYNSHFRTDNFDFKAENEWRFVPSVKQIGGNRISENYSTYKKFEDKYNRRLEP HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCH YALKFVNKDIKYVYVQNEAEKEHLVKSLGLFSTQVKLAEWKQ HHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLIHFTREFENLVSILESNSFLVRYCGEYFGDNTGKVISRAAHPMVSFSDYNHEELSTKK CEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCCHHHCCCE VTYGGYGVALHKAWAIENKLSPVNYVEKNSPVAQGLVSLLRARQRGKLPSNLRLSVIQLK EEECCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHH CFTKHVYGYNSHFRTDNFDFKAENEWRFVPSVKQIGGNRISENYSTYKKFEDKYNRRLEP HHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCH YALKFVNKDIKYVYVQNEAEKEHLVKSLGLFSTQVKLAEWKQ HHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA