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The map label for this gene is 218709867

Identifier: 218709867

GI number: 218709867

Start: 2024849

End: 2026003

Strand: Direct

Name: 218709867

Synonym: VS_1880

Alternate gene names: NA

Gene position: 2024849-2026003 (Clockwise)

Preceding gene: 218709866

Following gene: 218709877

Centisome position: 61.37

GC content: 45.97

Gene sequence:

>1155_bases
ATGAATAAAGATAGCATAATTTTTATTGGCTTAGATACGCATAAGTCATTTATTCAAGTCACTGTATTACAAGAACATCG
TGGGGCAAATCCACTTCACCTTGGCCGTATTAAATCGAATAAGTCCGCGTTGATTAAATTGGCCAAACAGCTGCAATCCA
AGTATCCCAAAGCCACTCTGCACTTTGTCTATGAAGCAGGACCATGTGGTTACTGGACTTATCGCTTAATGACGAGCCTT
GGACACTGCTGCTATGTCGTCGCTCCATCACTTATACCTAAAAAGCCAGGCGATAGAGTTAAAACCGACAAACGAGACGC
TGCAAAGCTCGCCAAGCTGTTAAAAGCCGAAGAGCTCACACCCATCTATGTACCGGAAGCAAAAGATGAAGCCATTCGAG
ACCTCTCGCGTGCCAGAGAAACCGCAATGAAAGATCTCAAAGACGCAAAATTCCAACTCAAAGGCTTTCTTCTTCGCAAT
AATATCCAAGCGACGGTGAATGATAACTGGTCTAAAAAGCATCTACGGTGGCTAACCGACCTCATTCTTCCTCATCATAG
TCAGCAAATCGTTTTACAAGAGATGATCATTACCATCAATGAGCGAATACAGCGGCTTCAACGACTCGATAATGAACTAC
TCCATCAAGTCAAAAACTGGCGATACTATCCTGTGGTGAAAGCCATTCAAGCTATGCGTGGAGTCCGGTTACTCGTAGCA
CTCGGCACAATAGCCGAACTGGGTGACTTACGACGATTTGATCATCCAAGAAAGCTTATGGCTTACCTCGGACTCGTTCC
AACAGAAAACTCCAGTGGCGGTAAAACTCGTCGTGGTAGCTTAACAAAGTGTGGCAACAGTCGGGCCAGACGGTTGCTGG
TCGAAGGCGCACACACCTATAAGCACAAAGCGAACATCTCTGTAGAGCTCCAACTAAGGCAAGAAGGACTGCCTAAAGAG
ATCGTCGATATCGCTTGGCAGGCCCAGCAAAGGTTATGTCGTCGTTACCAACGATTGCTACAAAAAGGTAAACACCGAAA
TGTCGTTGTAGTCGCCATCGCTAGAGAGATGATCGCTTACATCTGGGCGATTGCTCGTGAAGTAGTCATCAGCGACGTCG
ATCCTAAAACTCGAATCGCTCGATTACCGGCATGA

Upstream 100 bases:

>100_bases
CATAATGACCCCCACGAAAGGTGCTAGCCTCCAATATCGTGGGTTAGCTTAAAGCCAGAGCCATAATTAGTGCGTCAAAC
AACTAAATTTGGAGGCTAGC

Downstream 100 bases:

>100_bases
AGACAGAATTAGTGTTATCGCATTGGATAAAGCATCGGGAGTGGCACAAACACCGGCGGCGTTAGGACGGCAATATAGCT
TCGGCTGTATTGAACCACGA

Product: ISVisp2 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MNKDSIIFIGLDTHKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYPKATLHFVYEAGPCGYWTYRLMTSL
GHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKAEELTPIYVPEAKDEAIRDLSRARETAMKDLKDAKFQLKGFLLRN
NIQATVNDNWSKKHLRWLTDLILPHHSQQIVLQEMIITINERIQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVRLLVA
LGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEGAHTYKHKANISVELQLRQEGLPKE
IVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIAREMIAYIWAIAREVVISDVDPKTRIARLPA

Sequences:

>Translated_384_residues
MNKDSIIFIGLDTHKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYPKATLHFVYEAGPCGYWTYRLMTSL
GHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKAEELTPIYVPEAKDEAIRDLSRARETAMKDLKDAKFQLKGFLLRN
NIQATVNDNWSKKHLRWLTDLILPHHSQQIVLQEMIITINERIQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVRLLVA
LGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEGAHTYKHKANISVELQLRQEGLPKE
IVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIAREMIAYIWAIAREVVISDVDPKTRIARLPA
>Mature_384_residues
MNKDSIIFIGLDTHKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYPKATLHFVYEAGPCGYWTYRLMTSL
GHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKAEELTPIYVPEAKDEAIRDLSRARETAMKDLKDAKFQLKGFLLRN
NIQATVNDNWSKKHLRWLTDLILPHHSQQIVLQEMIITINERIQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVRLLVA
LGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEGAHTYKHKANISVELQLRQEGLPKE
IVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIAREMIAYIWAIAREVVISDVDPKTRIARLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 44025; Mature: 44025

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDSIIFIGLDTHKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYPKATL
CCCCCEEEEEECCCCCCEEEEEEHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEE
HFVYEAGPCGYWTYRLMTSLGHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKAEELT
EEEEECCCCCHHHHHHHHHHCCHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PIYVPEAKDEAIRDLSRARETAMKDLKDAKFQLKGFLLRNNIQATVNDNWSKKHLRWLTD
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
LILPHHSQQIVLQEMIITINERIQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVRLLVA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEGAHTY
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCHHH
KHKANISVELQLRQEGLPKEIVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIAREMIAY
HCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
IWAIAREVVISDVDPKTRIARLPA
HHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MNKDSIIFIGLDTHKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYPKATL
CCCCCEEEEEECCCCCCEEEEEEHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEE
HFVYEAGPCGYWTYRLMTSLGHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKAEELT
EEEEECCCCCHHHHHHHHHHCCHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PIYVPEAKDEAIRDLSRARETAMKDLKDAKFQLKGFLLRNNIQATVNDNWSKKHLRWLTD
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH
LILPHHSQQIVLQEMIITINERIQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVRLLVA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEGAHTY
HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCHHH
KHKANISVELQLRQEGLPKEIVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIAREMIAY
HCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHH
IWAIAREVVISDVDPKTRIARLPA
HHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]