Click here to switch to the map view.

The map label for this gene is 218709855

Identifier: 218709855

GI number: 218709855

Start: 2016577

End: 2017020

Strand: Reverse

Name: 218709855

Synonym: VS_1868

Alternate gene names: NA

Gene position: 2017020-2016577 (Counterclockwise)

Preceding gene: 218709858

Following gene: 218709854

Centisome position: 61.13

GC content: 40.32

Gene sequence:

>444_bases
TTGAGTTTGAAAGGTATTTGTTTGTGTGGCGAGGTGTCGTTTGAGCTATCTGGTGCCTTACCTCCGATTTATCAATGTCA
TTGTTCGCTTTGTCGCAAAGTATCTGGGTCGTCATCGAATTCAGCTTTAATTGTTAAAGCGGATAATTTCAAATGGCTTT
CGAGTACAAATTCTATTGGTCGTTATGTTTCAAGTTCAGGCTTTAAATCGGAATTTTGTCAGTGTTGTGGAAGCCCTGTA
CCGAACCTTAGCTCAAGCAAAGATAAATATTGGGTGCCAGCAGAATTGATGTCCGAAGATTTAGAAACAACAATCAAGGC
TCATGTCTATGTTAATTCGCGAGCAAACTGGGATGAGGCATTTATCTGCGATAACGTCGAAGAATTTGCCACAATGCCTT
CAGAATCTGAATGGTTGAAACTATCGGATAAACCGTACGCATAA

Upstream 100 bases:

>100_bases
ACTAATTATGGCTCTGGCTTTAAGCTAACCCACGATATTGGAGGCTAGCACCTTTCGTGGGGGTCATTATGTCTATGCGT
ACTTTTTTGATTAAGGGAGT

Downstream 100 bases:

>100_bases
CAAATGCATCAACACGATTTGCTACACTCGGCGTTGTCAGTTTGCCTTTAGTTTCAGTGATTAAGGCGTTAAAATTCAGC
TAGGTCTGTATCGTAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSLKGICLCGEVSFELSGALPPIYQCHCSLCRKVSGSSSNSALIVKADNFKWLSSTNSIGRYVSSSGFKSEFCQCCGSPV
PNLSSSKDKYWVPAELMSEDLETTIKAHVYVNSRANWDEAFICDNVEEFATMPSESEWLKLSDKPYA

Sequences:

>Translated_147_residues
MSLKGICLCGEVSFELSGALPPIYQCHCSLCRKVSGSSSNSALIVKADNFKWLSSTNSIGRYVSSSGFKSEFCQCCGSPV
PNLSSSKDKYWVPAELMSEDLETTIKAHVYVNSRANWDEAFICDNVEEFATMPSESEWLKLSDKPYA
>Mature_146_residues
SLKGICLCGEVSFELSGALPPIYQCHCSLCRKVSGSSSNSALIVKADNFKWLSSTNSIGRYVSSSGFKSEFCQCCGSPVP
NLSSSKDKYWVPAELMSEDLETTIKAHVYVNSRANWDEAFICDNVEEFATMPSESEWLKLSDKPYA

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16203; Mature: 16072

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKGICLCGEVSFELSGALPPIYQCHCSLCRKVSGSSSNSALIVKADNFKWLSSTNSIG
CCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCHHH
RYVSSSGFKSEFCQCCGSPVPNLSSSKDKYWVPAELMSEDLETTIKAHVYVNSRANWDEA
HHHCCCCCHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHEEEEEEEECCCCCCCCE
FICDNVEEFATMPSESEWLKLSDKPYA
EECCCHHHHHCCCCCCCEEEECCCCCC
>Mature Secondary Structure 
SLKGICLCGEVSFELSGALPPIYQCHCSLCRKVSGSSSNSALIVKADNFKWLSSTNSIG
CCCCEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCHHH
RYVSSSGFKSEFCQCCGSPVPNLSSSKDKYWVPAELMSEDLETTIKAHVYVNSRANWDEA
HHHCCCCCHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHEEEEEEEECCCCCCCCE
FICDNVEEFATMPSESEWLKLSDKPYA
EECCCHHHHHCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA