| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709854
Identifier: 218709854
GI number: 218709854
Start: 2016152
End: 2016439
Strand: Reverse
Name: 218709854
Synonym: VS_1867
Alternate gene names: NA
Gene position: 2016439-2016152 (Counterclockwise)
Preceding gene: 218709855
Following gene: 218709853
Centisome position: 61.12
GC content: 38.19
Gene sequence:
>288_bases ATGCTAGGAAAGCATCAAAAACCTTATGAGGAGTTTTATCACTCCACTCATGAAAATGAACATCTTGATACCAAAACGGA GTTACTAGTTGGTTTATCGGCTGCAATGGCAATGAATTGCTTACCTTGTACGCGATACTATCTAGCGCAGTCAAAGAAAG CAGGTATTACAAAAGGTGAAATTTCTGATGTAACAGCAAAAGTAATGGCGGTTGCAGCAGGGCAGAAAAAACTTCAAATG CAGGAGGTCTTAAGTAAGTACAAAATAGACCTCGATACATATGAATAA
Upstream 100 bases:
>100_bases CAGTTTGCCTTTAGTTTCAGTGATTAAGGCGTTAAAATTCAGCTAGGTCTGTATCGTAGCAAACGTGTTATGCAGGCGTT AGAACTTACACGGAGATATC
Downstream 100 bases:
>100_bases CGTTCTAACAAGGCGCTAAACCCGACACTCAACGCTTGGCATTTTCGCTTCGCAAAAGTATATGCCAAGGTTTCGTGCGG GTTAGCGTGGCGTTAGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MLGKHQKPYEEFYHSTHENEHLDTKTELLVGLSAAMAMNCLPCTRYYLAQSKKAGITKGEISDVTAKVMAVAAGQKKLQM QEVLSKYKIDLDTYE
Sequences:
>Translated_95_residues MLGKHQKPYEEFYHSTHENEHLDTKTELLVGLSAAMAMNCLPCTRYYLAQSKKAGITKGEISDVTAKVMAVAAGQKKLQM QEVLSKYKIDLDTYE >Mature_95_residues MLGKHQKPYEEFYHSTHENEHLDTKTELLVGLSAAMAMNCLPCTRYYLAQSKKAGITKGEISDVTAKVMAVAAGQKKLQM QEVLSKYKIDLDTYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10712; Mature: 10712
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGKHQKPYEEFYHSTHENEHLDTKTELLVGLSAAMAMNCLPCTRYYLAQSKKAGITKGE CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC ISDVTAKVMAVAAGQKKLQMQEVLSKYKIDLDTYE HHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLGKHQKPYEEFYHSTHENEHLDTKTELLVGLSAAMAMNCLPCTRYYLAQSKKAGITKGE CCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC ISDVTAKVMAVAAGQKKLQMQEVLSKYKIDLDTYE HHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA