| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218709849
Identifier: 218709849
GI number: 218709849
Start: 2013607
End: 2013945
Strand: Reverse
Name: 218709849
Synonym: VS_1862
Alternate gene names: NA
Gene position: 2013945-2013607 (Counterclockwise)
Preceding gene: 218709850
Following gene: 218709847
Centisome position: 61.04
GC content: 40.12
Gene sequence:
>339_bases GTGGAGGTCTGTATGAATATCAAAGAGTCTGATTGGAAAATCTTTTGTGAGATAAAGAGTGAAGCTGCGCAACTGTTTTG TACTCGTCAGCTAGATGAAGCCATCAAAGCGATTACTGATGAATCAGAATCTGTAGGGGAAAGGTTTCACTTTATGTGCG AGTACTCTAAAGAATCTCAAAAGCAAATGAAGCTTATTTTTGATGGCCATTCTCGAAGCCGAGCATTTATCCAACTCATG CAAATGTGCGAGGAAGGTTTGGTTGTACCAAAACAATTCGAACGCCTTTCAGAGGAACTCAAAAAAGACATTACGAACGC TCTAGAAAGAAGAGCCTAA
Upstream 100 bases:
>100_bases ATTGGATTTCGTGTTAATAGCGCTCTGATTTACTATTGGGTATTCGTGTCGCTCACGTCTTTTAAACGCCGTAATGTTCT ACCCTAAGAAGTAACACTTT
Downstream 100 bases:
>100_bases GGAAAGTCGGGTATTCAGGCCGCGTGACCCTGTAAATGTACGATAACCTTCCAAGGTAAACTGCTACAACCATCCTAATA TTACTCCTCTTTAGTCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MEVCMNIKESDWKIFCEIKSEAAQLFCTRQLDEAIKAITDESESVGERFHFMCEYSKESQKQMKLIFDGHSRSRAFIQLM QMCEEGLVVPKQFERLSEELKKDITNALERRA
Sequences:
>Translated_112_residues MEVCMNIKESDWKIFCEIKSEAAQLFCTRQLDEAIKAITDESESVGERFHFMCEYSKESQKQMKLIFDGHSRSRAFIQLM QMCEEGLVVPKQFERLSEELKKDITNALERRA >Mature_112_residues MEVCMNIKESDWKIFCEIKSEAAQLFCTRQLDEAIKAITDESESVGERFHFMCEYSKESQKQMKLIFDGHSRSRAFIQLM QMCEEGLVVPKQFERLSEELKKDITNALERRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13176; Mature: 13176
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVCMNIKESDWKIFCEIKSEAAQLFCTRQLDEAIKAITDESESVGERFHFMCEYSKESQ CCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHH KQMKLIFDGHSRSRAFIQLMQMCEEGLVVPKQFERLSEELKKDITNALERRA HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEVCMNIKESDWKIFCEIKSEAAQLFCTRQLDEAIKAITDESESVGERFHFMCEYSKESQ CCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHH KQMKLIFDGHSRSRAFIQLMQMCEEGLVVPKQFERLSEELKKDITNALERRA HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA