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The map label for this gene is ycdQ [C]

Identifier: 218709847

GI number: 218709847

Start: 2011779

End: 2012507

Strand: Reverse

Name: ycdQ [C]

Synonym: VS_1860

Alternate gene names: 218709847

Gene position: 2012507-2011779 (Counterclockwise)

Preceding gene: 218709849

Following gene: 218709846

Centisome position: 61.0

GC content: 44.86

Gene sequence:

>729_bases
ATGGAACCGGTAAGCATTGTCGTAATTACGCTAAACGAAGAGAAACGCATCAGCCGCTTAATGGAAGAGTTGAGTGTGCA
AACCCATCAAGAATTTGAGGTGATTGTTGTCGACTCGAACAGTGAAGACAACACAAGAGGGGTGGCACAAGCTTATGAAA
GCGCGTTGCCAAAGTTAACGGTTCATCATATGGAAAATCGCGGTGTGAGCCTTGGCAGAAACACAGGCGCTTCATTAGCG
CAGTACAACCGAATCCTTTTCTTAGATGCCGACGTGAGTTTGCCCCGAAACTTCCTTGCGAAAGCGCTTTATGAACTAGA
GGAGAAGAAGCTTGAAGTGGCGGGTGTGTACATGAGCTCGAAAGGTCTGCCGCTTGTACACAAGTTTGGTTACGGGCTAT
TTAACGCAGGCTTATTTACTACCCAGTTCTTTTTCCCGACGGCGATTGGCGCCTGTATTTTCTCGACTAAACGAGCGCAT
GATGAAATCGGCGGTTTCGATGAAGAGATCGTACTGTGTGAAGACTGTGACTATGTAAAACGTGCGAGCAAAACATGGCG
ATTTAGATTCCTGAATATGACCTTTGGTTTTGACCCACGTCGTTTAAACCAAGATGGTGTTGTAAAGACAGGATCTACTT
ACCTTAAAGCCAATGTAAGACGCTTTTTTAAAGGCGAAATGCGTAACAACGAGATGAACTACAAGTTCGGTCATTATAAA
GAACAGTAA

Upstream 100 bases:

>100_bases
CAAGTTAATGAACGGAAAATGAATGTTTACCTAAGGCTTGGTTAAGGCTTGGTTGGTTAATCTTAGTGGTAATTAAACAG
CAGAATGAATAGGTGAAAAT

Downstream 100 bases:

>100_bases
GCACTGAGGTTGTTATGTTTGATGGACTAGGGCTGTTTCTGGGGGCGTTGGGTGATGCTCTCATTGGCCCAAACCTATTT
GTACCGGGAGAGCCCTTCTT

Product: putative glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase GT2 Family; UDP-Hexose Transferase; Teichoic Acid Biosynthesis Related Protein; Beta1 3-Glucosyltransferase

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MEPVSIVVITLNEEKRISRLMEELSVQTHQEFEVIVVDSNSEDNTRGVAQAYESALPKLTVHHMENRGVSLGRNTGASLA
QYNRILFLDADVSLPRNFLAKALYELEEKKLEVAGVYMSSKGLPLVHKFGYGLFNAGLFTTQFFFPTAIGACIFSTKRAH
DEIGGFDEEIVLCEDCDYVKRASKTWRFRFLNMTFGFDPRRLNQDGVVKTGSTYLKANVRRFFKGEMRNNEMNYKFGHYK
EQ

Sequences:

>Translated_242_residues
MEPVSIVVITLNEEKRISRLMEELSVQTHQEFEVIVVDSNSEDNTRGVAQAYESALPKLTVHHMENRGVSLGRNTGASLA
QYNRILFLDADVSLPRNFLAKALYELEEKKLEVAGVYMSSKGLPLVHKFGYGLFNAGLFTTQFFFPTAIGACIFSTKRAH
DEIGGFDEEIVLCEDCDYVKRASKTWRFRFLNMTFGFDPRRLNQDGVVKTGSTYLKANVRRFFKGEMRNNEMNYKFGHYK
EQ
>Mature_242_residues
MEPVSIVVITLNEEKRISRLMEELSVQTHQEFEVIVVDSNSEDNTRGVAQAYESALPKLTVHHMENRGVSLGRNTGASLA
QYNRILFLDADVSLPRNFLAKALYELEEKKLEVAGVYMSSKGLPLVHKFGYGLFNAGLFTTQFFFPTAIGACIFSTKRAH
DEIGGFDEEIVLCEDCDYVKRASKTWRFRFLNMTFGFDPRRLNQDGVVKTGSTYLKANVRRFFKGEMRNNEMNYKFGHYK
EQ

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27695; Mature: 27695

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPVSIVVITLNEEKRISRLMEELSVQTHQEFEVIVVDSNSEDNTRGVAQAYESALPKLT
CCCEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEE
VHHMENRGVSLGRNTGASLAQYNRILFLDADVSLPRNFLAKALYELEEKKLEVAGVYMSS
EEHHCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEEECC
KGLPLVHKFGYGLFNAGLFTTQFFFPTAIGACIFSTKRAHDEIGGFDEEIVLCEDCDYVK
CCCCHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
RASKTWRFRFLNMTFGFDPRRLNQDGVVKTGSTYLKANVRRFFKGEMRNNEMNYKFGHYK
HCCCCEEEEEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EQ
CC
>Mature Secondary Structure
MEPVSIVVITLNEEKRISRLMEELSVQTHQEFEVIVVDSNSEDNTRGVAQAYESALPKLT
CCCEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEE
VHHMENRGVSLGRNTGASLAQYNRILFLDADVSLPRNFLAKALYELEEKKLEVAGVYMSS
EEHHCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHEEEEEEEECC
KGLPLVHKFGYGLFNAGLFTTQFFFPTAIGACIFSTKRAHDEIGGFDEEIVLCEDCDYVK
CCCCHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHH
RASKTWRFRFLNMTFGFDPRRLNQDGVVKTGSTYLKANVRRFFKGEMRNNEMNYKFGHYK
HCCCCEEEEEEEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA