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The map label for this gene is ybjE [H]

Identifier: 218709819

GI number: 218709819

Start: 1971590

End: 1972495

Strand: Direct

Name: ybjE [H]

Synonym: VS_1831

Alternate gene names: 218709819

Gene position: 1971590-1972495 (Clockwise)

Preceding gene: 218709818

Following gene: 218709820

Centisome position: 59.76

GC content: 45.36

Gene sequence:

>906_bases
ATGTTTACAGGGATGATCTTTATATTTGCGCCACTCGTCGTGGGGTATCTTTTTTCAATTTCGAACACTCAGAGGCTAGA
ATTTATCAACCGCTCTACTTCGCGGTTGATCTACGTGATTCTCGCGTTGATGGGACTAAGCTTAGCCGCACTCGATAACC
TAGGCAGTAACCTGCAGACAATTCTTCTATACACGGCCACTTTCTTCGTCTGCTTAAGCGTTTGTAATCTAATGGCGCTA
CCTGCTATTGATAAGTTACTGCCACTCCAGACAGACAGCTGTAATAAGAAACTCCCCCTGTCTTCTATGGCGATGGAGTC
TGCCAAACTCATCTTAGTGGTCGGTTCCGGCCTTATTGCGGGTTTAGTTCTGCCTATTGGACTTGATTGGGTTGATACCG
CGAGTGAATGGATTCTGTTTGTTCTACTGTTCTTTATTGGCATTCAGTTACGCAATAGCGGACTAACACTTCGTCAAATC
TTACTCAACAAGCACGGTATGGTAATCGCAATCGCAATCATCGCCACCTCAATGCTTGGTGGTATTATTGCGGCTTATAT
CCTTGATATCCCTCTGTTCAAAGCCTTGGCAATGTCTTCAGGGTTTGGTTGGTATTCTTTAGCTGGTATCTTGATGGGCG
ACGCCTTTGGTCCTATTTATGGTGGCGCTTCTTTCATGCTTGAGCTGTTAAGAGAGTTAGTTGCTTTAATACTTATTCCT
GTGCTGATCCGAAGCTACCCATGCACATCGATTGGTTATGCAGGCGCAACAGCGATGGATTTCACATTACCTGTCATTCA
AACCACAGGTGGCGTTCGGTGCGTGCCAGTCGCCATAGTCAGTGGCTTTATCCTCAGCTTGCTTGTCCCGATTTTGATGT
TGTTCTTTGTATCTCTTGCTAACTAG

Upstream 100 bases:

>100_bases
TTTTAATGCAAAGCTAAGTGACGTGATCAATACTAGCGGCTTCTAAGTTACTGTTAAATTGCTAGTAAATGCAATATGAA
GTCAATGCAATGGGGAAAGC

Downstream 100 bases:

>100_bases
ATCGCAGGAATAGCGTTTGTTTTAGATTAGAATGCAACTCGAATACCGATGCCCAAGACACCGATACAGTTACCGAAATA
AAAAGACACTAAGTGTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MFTGMIFIFAPLVVGYLFSISNTQRLEFINRSTSRLIYVILALMGLSLAALDNLGSNLQTILLYTATFFVCLSVCNLMAL
PAIDKLLPLQTDSCNKKLPLSSMAMESAKLILVVGSGLIAGLVLPIGLDWVDTASEWILFVLLFFIGIQLRNSGLTLRQI
LLNKHGMVIAIAIIATSMLGGIIAAYILDIPLFKALAMSSGFGWYSLAGILMGDAFGPIYGGASFMLELLRELVALILIP
VLIRSYPCTSIGYAGATAMDFTLPVIQTTGGVRCVPVAIVSGFILSLLVPILMLFFVSLAN

Sequences:

>Translated_301_residues
MFTGMIFIFAPLVVGYLFSISNTQRLEFINRSTSRLIYVILALMGLSLAALDNLGSNLQTILLYTATFFVCLSVCNLMAL
PAIDKLLPLQTDSCNKKLPLSSMAMESAKLILVVGSGLIAGLVLPIGLDWVDTASEWILFVLLFFIGIQLRNSGLTLRQI
LLNKHGMVIAIAIIATSMLGGIIAAYILDIPLFKALAMSSGFGWYSLAGILMGDAFGPIYGGASFMLELLRELVALILIP
VLIRSYPCTSIGYAGATAMDFTLPVIQTTGGVRCVPVAIVSGFILSLLVPILMLFFVSLAN
>Mature_301_residues
MFTGMIFIFAPLVVGYLFSISNTQRLEFINRSTSRLIYVILALMGLSLAALDNLGSNLQTILLYTATFFVCLSVCNLMAL
PAIDKLLPLQTDSCNKKLPLSSMAMESAKLILVVGSGLIAGLVLPIGLDWVDTASEWILFVLLFFIGIQLRNSGLTLRQI
LLNKHGMVIAIAIIATSMLGGIIAAYILDIPLFKALAMSSGFGWYSLAGILMGDAFGPIYGGASFMLELLRELVALILIP
VLIRSYPCTSIGYAGATAMDFTLPVIQTTGGVRCVPVAIVSGFILSLLVPILMLFFVSLAN

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=297, Percent_Identity=51.1784511784512, Blast_Score=276, Evalue=8e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 32329; Mature: 32329

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTGMIFIFAPLVVGYLFSISNTQRLEFINRSTSRLIYVILALMGLSLAALDNLGSNLQT
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ILLYTATFFVCLSVCNLMALPAIDKLLPLQTDSCNKKLPLSSMAMESAKLILVVGSGLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEECCHHHH
GLVLPIGLDWVDTASEWILFVLLFFIGIQLRNSGLTLRQILLNKHGMVIAIAIIATSMLG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
GIIAAYILDIPLFKALAMSSGFGWYSLAGILMGDAFGPIYGGASFMLELLRELVALILIP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
VLIRSYPCTSIGYAGATAMDFTLPVIQTTGGVRCVPVAIVSGFILSLLVPILMLFFVSLA
HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
N
C
>Mature Secondary Structure
MFTGMIFIFAPLVVGYLFSISNTQRLEFINRSTSRLIYVILALMGLSLAALDNLGSNLQT
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ILLYTATFFVCLSVCNLMALPAIDKLLPLQTDSCNKKLPLSSMAMESAKLILVVGSGLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEECCHHHH
GLVLPIGLDWVDTASEWILFVLLFFIGIQLRNSGLTLRQILLNKHGMVIAIAIIATSMLG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
GIIAAYILDIPLFKALAMSSGFGWYSLAGILMGDAFGPIYGGASFMLELLRELVALILIP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
VLIRSYPCTSIGYAGATAMDFTLPVIQTTGGVRCVPVAIVSGFILSLLVPILMLFFVSLA
HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]