| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709820
Identifier: 218709820
GI number: 218709820
Start: 1972670
End: 1973197
Strand: Direct
Name: 218709820
Synonym: VS_1832
Alternate gene names: NA
Gene position: 1972670-1973197 (Clockwise)
Preceding gene: 218709819
Following gene: 218709821
Centisome position: 59.79
GC content: 45.64
Gene sequence:
>528_bases ATGAAACGCCTTTGCGTCGCATTACTGCTAGCTTCAACTTCGACTTTCTCTTTTGCAGCAGATTCAATGTCTAAGACAAA TCAGTGCCAAGCAAAAAAATATGATGCGTACATCGACGCCTCTTTAGGTTGGTATGCTGACCTCGCTACATTAACTTCTG AGCAATACCCAGAATTGACAGAAGTAAGCGAGTGGTTCCTAGAAGGTCGTAAGCACCACTTCGAGCTTAATCGCGCTGCG GTAAACTACTACCTTGTGAACGATTCAAGCAAAGTGGCAACAGAGCAACCGGTAGAAGGCTGGCTGCAACTGGAACAACA CGACATTAAGACGTTATCAACACGTGATGATGAACTTGGTAGAATTGCGAAAACAACGTTCGACGACCGCCAATCAACAC CTCACGCTCAAAACTACGAGCTACGTTCCGCCTTTGCTGAGCTGCTTAGTCACCCTAAGCAAATCGATACAGCACTGCAG CGTTACAACCAGTCGATCGCCAAACTAGAAGCGATTAAGTGTAAATAA
Upstream 100 bases:
>100_bases GAAATAAAAAGACACTAAGTGTCATTGCTCAACAAATAATGATCACGGTAATCTGTAACGACAACGTTATAAAAAGAATA AACTTACAAAAGGAACCGCT
Downstream 100 bases:
>100_bases CCCTTAATTTACTATGCTTTTATGGGAAGTTGGATTTCATAATTAAGACGGGACATTGTTCCCGTTTTCGTTTAGATTAT CCCGCTCGCGTCAATATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELTEVSEWFLEGRKHHFELNRAA VNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELGRIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQ RYNQSIAKLEAIKCK
Sequences:
>Translated_175_residues MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELTEVSEWFLEGRKHHFELNRAA VNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELGRIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQ RYNQSIAKLEAIKCK >Mature_175_residues MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELTEVSEWFLEGRKHHFELNRAA VNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELGRIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQ RYNQSIAKLEAIKCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19974; Mature: 19974
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELT CHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCHH EVSEWFLEGRKHHFELNRAAVNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELG HHHHHHHHCCHHHEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH RIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQRYNQSIAKLEAIKCK HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELT CHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCHH EVSEWFLEGRKHHFELNRAAVNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELG HHHHHHHHCCHHHEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH RIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQRYNQSIAKLEAIKCK HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA