Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709820

Identifier: 218709820

GI number: 218709820

Start: 1972670

End: 1973197

Strand: Direct

Name: 218709820

Synonym: VS_1832

Alternate gene names: NA

Gene position: 1972670-1973197 (Clockwise)

Preceding gene: 218709819

Following gene: 218709821

Centisome position: 59.79

GC content: 45.64

Gene sequence:

>528_bases
ATGAAACGCCTTTGCGTCGCATTACTGCTAGCTTCAACTTCGACTTTCTCTTTTGCAGCAGATTCAATGTCTAAGACAAA
TCAGTGCCAAGCAAAAAAATATGATGCGTACATCGACGCCTCTTTAGGTTGGTATGCTGACCTCGCTACATTAACTTCTG
AGCAATACCCAGAATTGACAGAAGTAAGCGAGTGGTTCCTAGAAGGTCGTAAGCACCACTTCGAGCTTAATCGCGCTGCG
GTAAACTACTACCTTGTGAACGATTCAAGCAAAGTGGCAACAGAGCAACCGGTAGAAGGCTGGCTGCAACTGGAACAACA
CGACATTAAGACGTTATCAACACGTGATGATGAACTTGGTAGAATTGCGAAAACAACGTTCGACGACCGCCAATCAACAC
CTCACGCTCAAAACTACGAGCTACGTTCCGCCTTTGCTGAGCTGCTTAGTCACCCTAAGCAAATCGATACAGCACTGCAG
CGTTACAACCAGTCGATCGCCAAACTAGAAGCGATTAAGTGTAAATAA

Upstream 100 bases:

>100_bases
GAAATAAAAAGACACTAAGTGTCATTGCTCAACAAATAATGATCACGGTAATCTGTAACGACAACGTTATAAAAAGAATA
AACTTACAAAAGGAACCGCT

Downstream 100 bases:

>100_bases
CCCTTAATTTACTATGCTTTTATGGGAAGTTGGATTTCATAATTAAGACGGGACATTGTTCCCGTTTTCGTTTAGATTAT
CCCGCTCGCGTCAATATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELTEVSEWFLEGRKHHFELNRAA
VNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELGRIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQ
RYNQSIAKLEAIKCK

Sequences:

>Translated_175_residues
MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELTEVSEWFLEGRKHHFELNRAA
VNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELGRIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQ
RYNQSIAKLEAIKCK
>Mature_175_residues
MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELTEVSEWFLEGRKHHFELNRAA
VNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELGRIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQ
RYNQSIAKLEAIKCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19974; Mature: 19974

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELT
CHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCHH
EVSEWFLEGRKHHFELNRAAVNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELG
HHHHHHHHCCHHHEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
RIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQRYNQSIAKLEAIKCK
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRLCVALLLASTSTFSFAADSMSKTNQCQAKKYDAYIDASLGWYADLATLTSEQYPELT
CHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCHH
EVSEWFLEGRKHHFELNRAAVNYYLVNDSSKVATEQPVEGWLQLEQHDIKTLSTRDDELG
HHHHHHHHCCHHHEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
RIAKTTFDDRQSTPHAQNYELRSAFAELLSHPKQIDTALQRYNQSIAKLEAIKCK
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA