| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709789
Identifier: 218709789
GI number: 218709789
Start: 1930221
End: 1930763
Strand: Reverse
Name: 218709789
Synonym: VS_1801
Alternate gene names: NA
Gene position: 1930763-1930221 (Counterclockwise)
Preceding gene: 218709793
Following gene: 218709788
Centisome position: 58.52
GC content: 41.07
Gene sequence:
>543_bases ATGAAAGGAATCATATTCACCGAATTTTTAGAGCTTGTTGAAGACAAGTTTGGGTTAGAGCTTTTGGAAGAAGTTCTAGA GATGTCAGAAGATGAAGGGATCTACACATCAGTCGGAAGTTACGACCACAAAGATCTTGTTCGATTGATTATAAACTTGA GTAAGAAAACCGATATTGATGCAGCGAGCCTGCAACGTGTTTTTGGACAATCGGTTTTTAAGAACTTACTGGCCTCATTA CCGAATAAAGCGAGCCTCGCCCATAGCAACACCACTTTTCAATTTATTCAGCACGTAGAGCGTTACATTCACGTAGAAGT GAAGAAGCTCTACCCAGATGCTGAGCCTCCAAAATTTAGCTTTATCACCACGACCGAAGCGCAACTTGTTTTTGACTATA AAAGCGCACGATGTATGTCTCACGTTTGTTTGGGATTAATCGAGGGGTGTGCTGACTATCATGGTGAAACCATCGTGGTA GAAATGACACCTCAGAATGATGACCAAAGTGTGGTTAGGTTTAATCTCAAAGTAGAAAAGTGA
Upstream 100 bases:
>100_bases TGTCATAAATTGGGTGATGAAACGTACATTTTCTGTTTAAGAATTTGATAACAATGACTTAGTGGACCATTCTAAAAAGA AATAGAAGAAAAGGTATGAA
Downstream 100 bases:
>100_bases TATGGATCTGGCATCTGCCCAAGAGAAAAAACTTAAACGTCAAATAGCAGCACGGAAAGTGGCTGAAGCTTTGTTGGAGC AAAAGAGTCTCGAGCTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Guanylate Cyclase-Related Protein; Guanylate Cyclase; Guanylate Cyclase-Like Protein; 4-Vinyl Reductase 4VR
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKGIIFTEFLELVEDKFGLELLEEVLEMSEDEGIYTSVGSYDHKDLVRLIINLSKKTDIDAASLQRVFGQSVFKNLLASL PNKASLAHSNTTFQFIQHVERYIHVEVKKLYPDAEPPKFSFITTTEAQLVFDYKSARCMSHVCLGLIEGCADYHGETIVV EMTPQNDDQSVVRFNLKVEK
Sequences:
>Translated_180_residues MKGIIFTEFLELVEDKFGLELLEEVLEMSEDEGIYTSVGSYDHKDLVRLIINLSKKTDIDAASLQRVFGQSVFKNLLASL PNKASLAHSNTTFQFIQHVERYIHVEVKKLYPDAEPPKFSFITTTEAQLVFDYKSARCMSHVCLGLIEGCADYHGETIVV EMTPQNDDQSVVRFNLKVEK >Mature_180_residues MKGIIFTEFLELVEDKFGLELLEEVLEMSEDEGIYTSVGSYDHKDLVRLIINLSKKTDIDAASLQRVFGQSVFKNLLASL PNKASLAHSNTTFQFIQHVERYIHVEVKKLYPDAEPPKFSFITTTEAQLVFDYKSARCMSHVCLGLIEGCADYHGETIVV EMTPQNDDQSVVRFNLKVEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20469; Mature: 20469
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIIFTEFLELVEDKFGLELLEEVLEMSEDEGIYTSVGSYDHKDLVRLIINLSKKTDID CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCC AASLQRVFGQSVFKNLLASLPNKASLAHSNTTFQFIQHVERYIHVEVKKLYPDAEPPKFS HHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE FITTTEAQLVFDYKSARCMSHVCLGLIEGCADYHGETIVVEMTPQNDDQSVVRFNLKVEK EEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEECC >Mature Secondary Structure MKGIIFTEFLELVEDKFGLELLEEVLEMSEDEGIYTSVGSYDHKDLVRLIINLSKKTDID CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCC AASLQRVFGQSVFKNLLASLPNKASLAHSNTTFQFIQHVERYIHVEVKKLYPDAEPPKFS HHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE FITTTEAQLVFDYKSARCMSHVCLGLIEGCADYHGETIVVEMTPQNDDQSVVRFNLKVEK EEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA