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The map label for this gene is 218709787

Identifier: 218709787

GI number: 218709787

Start: 1927727

End: 1928371

Strand: Reverse

Name: 218709787

Synonym: VS_1799

Alternate gene names: NA

Gene position: 1928371-1927727 (Counterclockwise)

Preceding gene: 218709788

Following gene: 218709785

Centisome position: 58.45

GC content: 38.29

Gene sequence:

>645_bases
TTGAAAAACTATAAAAATGGATTCGATATGAAAAAAATGATAGTGACGCTTGCTCTAATTGCACCTTTATCTGCAGTGGC
TGCACAAAAAGACCCAAATGGTTTCTATATCGGAGTAGGAGCTGGTTCAACTGAACTTGATGATGGTGGTTTTGGTAAGG
CCATAACTCGCAAAACCACAACAACTGAAACTGAATCACCTTCTTATAAACTCATTGCCGGTTATCAGATCAACCGTATT
ATTGGTATCGAAGGCCAATATACTAAATATGGAACGTCTACAACAAAAGTAGGCAGTTCAAAAGCATTCACAACAGACTT
TAGTTCAATTAGCGTTGCTGCGAATGTTGGTTATACGTTCGATATTGGTCTTCGACCTTATGCACTTTTAGGTTATAGCT
TTTTAAATTCAGAAATTGAAAACAGTGGTAATAATAAATACTTTGCGACTAAGTCATCAACCGTATCTGGTATAAAAATG
GGGGTGGGCGTAGAGTATGCAATTCCTGCTGCACCAGCTCTAGCATTACGTGCAGGTATTGATTGGGAAGCAGCTGATAT
CAAAGTGAAAGATGAAAAGAACAAAGAGTTATCTAACGTTCACACACTCGGCTCATTCTATTTGGCTACAACATACACCT
TCTAG

Upstream 100 bases:

>100_bases
CTCTAATGTCTTGAGTATATTGTCAATGTAACAAGTGAGCTGACAATGCTATACGTTCACTTACTTTATTGGTCGCTTTT
ATTAATTATATTAAGGAGGT

Downstream 100 bases:

>100_bases
GCTAGTGTTATTGAAAAGCTAAGTAGGTGATTGCCCACTTAGCTTTTTTAATATTAAAGTACTTTCCAGATTGGTTTTTT
AGCTGTTTTTAATAACCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein A

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKNYKNGFDMKKMIVTLALIAPLSAVAAQKDPNGFYIGVGAGSTELDDGGFGKAITRKTTTTETESPSYKLIAGYQINRI
IGIEGQYTKYGTSTTKVGSSKAFTTDFSSISVAANVGYTFDIGLRPYALLGYSFLNSEIENSGNNKYFATKSSTVSGIKM
GVGVEYAIPAAPALALRAGIDWEAADIKVKDEKNKELSNVHTLGSFYLATTYTF

Sequences:

>Translated_214_residues
MKNYKNGFDMKKMIVTLALIAPLSAVAAQKDPNGFYIGVGAGSTELDDGGFGKAITRKTTTTETESPSYKLIAGYQINRI
IGIEGQYTKYGTSTTKVGSSKAFTTDFSSISVAANVGYTFDIGLRPYALLGYSFLNSEIENSGNNKYFATKSSTVSGIKM
GVGVEYAIPAAPALALRAGIDWEAADIKVKDEKNKELSNVHTLGSFYLATTYTF
>Mature_214_residues
MKNYKNGFDMKKMIVTLALIAPLSAVAAQKDPNGFYIGVGAGSTELDDGGFGKAITRKTTTTETESPSYKLIAGYQINRI
IGIEGQYTKYGTSTTKVGSSKAFTTDFSSISVAANVGYTFDIGLRPYALLGYSFLNSEIENSGNNKYFATKSSTVSGIKM
GVGVEYAIPAAPALALRAGIDWEAADIKVKDEKNKELSNVHTLGSFYLATTYTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22935; Mature: 22935

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS00050 RIBOSOMAL_L23

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNYKNGFDMKKMIVTLALIAPLSAVAAQKDPNGFYIGVGAGSTELDDGGFGKAITRKTT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEECCC
TTETESPSYKLIAGYQINRIIGIEGQYTKYGTSTTKVGSSKAFTTDFSSISVAANVGYTF
CCCCCCCCEEEEEEEEEEEEEECCCCCEECCCCEEECCCCCEEEECCCCEEEEEECCEEE
DIGLRPYALLGYSFLNSEIENSGNNKYFATKSSTVSGIKMGVGVEYAIPAAPALALRAGI
EECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCEEEECCCCCCCHHHCCC
DWEAADIKVKDEKNKELSNVHTLGSFYLATTYTF
CCCEEEEEEECCCCCHHHHHHHHHEEEEEEEECC
>Mature Secondary Structure
MKNYKNGFDMKKMIVTLALIAPLSAVAAQKDPNGFYIGVGAGSTELDDGGFGKAITRKTT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEECCC
TTETESPSYKLIAGYQINRIIGIEGQYTKYGTSTTKVGSSKAFTTDFSSISVAANVGYTF
CCCCCCCCEEEEEEEEEEEEEECCCCCEECCCCEEECCCCCEEEECCCCEEEEEECCEEE
DIGLRPYALLGYSFLNSEIENSGNNKYFATKSSTVSGIKMGVGVEYAIPAAPALALRAGI
EECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCEEEECCCCCCCHHHCCC
DWEAADIKVKDEKNKELSNVHTLGSFYLATTYTF
CCCEEEEEEECCCCCHHHHHHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA