| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709755
Identifier: 218709755
GI number: 218709755
Start: 1889267
End: 1890499
Strand: Reverse
Name: 218709755
Synonym: VS_1767
Alternate gene names: NA
Gene position: 1890499-1889267 (Counterclockwise)
Preceding gene: 218709756
Following gene: 218709754
Centisome position: 57.3
GC content: 49.39
Gene sequence:
>1233_bases ATGAAAAGGATTGTGTTAACAGGAACGCAGTTATCTTTAACCTTGGCGGCGACAGTTGGGCTAATGCAAGTGTCGTTGCC ATGTGTGGCGGCAGGTTTTAGCTCTGAATTCGTAGAACAGGTCACCCCACGGCTCGCAGGGCAGGTTAACCTTGAACACA GGCAGTTCTTTAGCGACGGCTTGCAAGGGCAAGATAAAGGGCAAAGCTCACTGGTGTTGCAACCAGAGTTTTATTGGGAA CAACAAGAGGGCAACGGCAGCTTTACCTTCACTCCGTTTTACCGCCTAGACAGCGAAGACGATGAGCGAACCCATGGCGA TGTTCGTGAAGCTCTGTACCTCACGTATTGGGATGATTACGAACTTAGAGCGGGTGTCGGCAAGGTGTTTTGGGGCGTGA CCGAATCAGCGCATTTGGTGGATGTGGTAAACCAAACCGATGCCATTGAATCGGTCGATGGCGAATCGAAGTTGGGTCAG CCTATGGTGCACTTCACCTCGATAAAAGAGTGGGGAACCATCGATGCCATGTTACTGCCGTATTTTCGTGAACGTACCTT CGCAGGGGAAGACGGTCGGTTAAGGCCAACCGTGCCTGTATCGGATGATGCGCTTTACGAATCGTCGAGAGAAGAAAAGC ATGTTGATGTGGCATTGCGTTATAGCCAAATGTACGGCGATTGGGATGTCGGTTTAAGTTATCTAGGTGGTACAAACCGC GACCCTTACTACCGTGTAGAAGGCAATGAACTCAAGCCGTATTACGCGCAAATGCAGCACTTCGGACTCGATGTACAAGG CATTATGGGCGATTGGTTGTGGAAGCTAGAAAGCATTTATCGCGATAGCTACGACAACCACACAGGCGTCGCGACAGGCT TTGAATACACATGGGTTGGGGCGCTTGAATCCTATTGGGACATCGGCTTCATTGCGGAATACTTGTATGACAGCCGAGGT AACAACGCCCAAACCATCGGTCAAAACGATGTGTTTATTGGTGCTCGTTTCGCCTTGAACGATGAAGACGGCACCGAAGT GCTTACAGGCATCACTCAGGACTTAGATAACAGCGATGTCTACAGTGCCAAGTTGGAAGCATCAAGCCGCATCAACAACA ACCTCAAGTGGCGATTGAACGCTTGGTTGTTTGAGAACGAAACCCCAGAAGACTTGTTGTTCTTTGCTCGTAAGGATGAT TTTGTCGAAGTGGCGTTGGAGTATTACTTCTAA
Upstream 100 bases:
>100_bases GAGCACGGTACTAACCACGACAGATTTAGCGTTCCAGACCGGTCTTAAGGACAAGGATTTTCAAAAAAACACACTTAAAC GTGCAAAGTAAGGCAAGAAT
Downstream 100 bases:
>100_bases AGGCTCGATGTTTTAGCTTCAATTTTTAAGTTTAAATTCAGATTTTCTACGAATAAACCAAAGAGCGGTGGTCTTAAACC TCTCTCCTTGGTTTCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKRIVLTGTQLSLTLAATVGLMQVSLPCVAAGFSSEFVEQVTPRLAGQVNLEHRQFFSDGLQGQDKGQSSLVLQPEFYWE QQEGNGSFTFTPFYRLDSEDDERTHGDVREALYLTYWDDYELRAGVGKVFWGVTESAHLVDVVNQTDAIESVDGESKLGQ PMVHFTSIKEWGTIDAMLLPYFRERTFAGEDGRLRPTVPVSDDALYESSREEKHVDVALRYSQMYGDWDVGLSYLGGTNR DPYYRVEGNELKPYYAQMQHFGLDVQGIMGDWLWKLESIYRDSYDNHTGVATGFEYTWVGALESYWDIGFIAEYLYDSRG NNAQTIGQNDVFIGARFALNDEDGTEVLTGITQDLDNSDVYSAKLEASSRINNNLKWRLNAWLFENETPEDLLFFARKDD FVEVALEYYF
Sequences:
>Translated_410_residues MKRIVLTGTQLSLTLAATVGLMQVSLPCVAAGFSSEFVEQVTPRLAGQVNLEHRQFFSDGLQGQDKGQSSLVLQPEFYWE QQEGNGSFTFTPFYRLDSEDDERTHGDVREALYLTYWDDYELRAGVGKVFWGVTESAHLVDVVNQTDAIESVDGESKLGQ PMVHFTSIKEWGTIDAMLLPYFRERTFAGEDGRLRPTVPVSDDALYESSREEKHVDVALRYSQMYGDWDVGLSYLGGTNR DPYYRVEGNELKPYYAQMQHFGLDVQGIMGDWLWKLESIYRDSYDNHTGVATGFEYTWVGALESYWDIGFIAEYLYDSRG NNAQTIGQNDVFIGARFALNDEDGTEVLTGITQDLDNSDVYSAKLEASSRINNNLKWRLNAWLFENETPEDLLFFARKDD FVEVALEYYF >Mature_410_residues MKRIVLTGTQLSLTLAATVGLMQVSLPCVAAGFSSEFVEQVTPRLAGQVNLEHRQFFSDGLQGQDKGQSSLVLQPEFYWE QQEGNGSFTFTPFYRLDSEDDERTHGDVREALYLTYWDDYELRAGVGKVFWGVTESAHLVDVVNQTDAIESVDGESKLGQ PMVHFTSIKEWGTIDAMLLPYFRERTFAGEDGRLRPTVPVSDDALYESSREEKHVDVALRYSQMYGDWDVGLSYLGGTNR DPYYRVEGNELKPYYAQMQHFGLDVQGIMGDWLWKLESIYRDSYDNHTGVATGFEYTWVGALESYWDIGFIAEYLYDSRG NNAQTIGQNDVFIGARFALNDEDGTEVLTGITQDLDNSDVYSAKLEASSRINNNLKWRLNAWLFENETPEDLLFFARKDD FVEVALEYYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46781; Mature: 46781
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIVLTGTQLSLTLAATVGLMQVSLPCVAAGFSSEFVEQVTPRLAGQVNLEHRQFFSDG CCEEEEECCCEEEEHHHHHHHHHEECCHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC LQGQDKGQSSLVLQPEFYWEQQEGNGSFTFTPFYRLDSEDDERTHGDVREALYLTYWDDY CCCCCCCCCCEEECCHHEEEEECCCCCEEEEEEEEECCCCCCHHHCCHHHEEEEEEECCC ELRAGVGKVFWGVTESAHLVDVVNQTDAIESVDGESKLGQPMVHFTSIKEWGTIDAMLLP HHHCCCCHHEECCCCCCHHEEHHCCHHHHHCCCCCHHCCCCEEEEECHHCCCCHHHHHHH YFRERTFAGEDGRLRPTVPVSDDALYESSREEKHVDVALRYSQMYGDWDVGLSYLGGTNR HHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEHHHCCCHHHHHHHCCCCCC DPYYRVEGNELKPYYAQMQHFGLDVQGIMGDWLWKLESIYRDSYDNHTGVATGFEYTWVG CCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEH ALESYWDIGFIAEYLYDSRGNNAQTIGQNDVFIGARFALNDEDGTEVLTGITQDLDNSDV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCC YSAKLEASSRINNNLKWRLNAWLFENETPEDLLFFARKDDFVEVALEYYF EEEEECHHHHCCCCEEEEEEEEEECCCCHHHHEEEECCCCCEEHHEECCC >Mature Secondary Structure MKRIVLTGTQLSLTLAATVGLMQVSLPCVAAGFSSEFVEQVTPRLAGQVNLEHRQFFSDG CCEEEEECCCEEEEHHHHHHHHHEECCHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC LQGQDKGQSSLVLQPEFYWEQQEGNGSFTFTPFYRLDSEDDERTHGDVREALYLTYWDDY CCCCCCCCCCEEECCHHEEEEECCCCCEEEEEEEEECCCCCCHHHCCHHHEEEEEEECCC ELRAGVGKVFWGVTESAHLVDVVNQTDAIESVDGESKLGQPMVHFTSIKEWGTIDAMLLP HHHCCCCHHEECCCCCCHHEEHHCCHHHHHCCCCCHHCCCCEEEEECHHCCCCHHHHHHH YFRERTFAGEDGRLRPTVPVSDDALYESSREEKHVDVALRYSQMYGDWDVGLSYLGGTNR HHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEHHHCCCHHHHHHHCCCCCC DPYYRVEGNELKPYYAQMQHFGLDVQGIMGDWLWKLESIYRDSYDNHTGVATGFEYTWVG CCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEEH ALESYWDIGFIAEYLYDSRGNNAQTIGQNDVFIGARFALNDEDGTEVLTGITQDLDNSDV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCC YSAKLEASSRINNNLKWRLNAWLFENETPEDLLFFARKDDFVEVALEYYF EEEEECHHHHCCCCEEEEEEEEEECCCCHHHHEEEECCCCCEEHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA