Click here to switch to the map view.

The map label for this gene is pheT [H]

Identifier: 218709753

GI number: 218709753

Start: 1885488

End: 1887875

Strand: Reverse

Name: pheT [H]

Synonym: VS_1765

Alternate gene names: 218709753

Gene position: 1887875-1885488 (Counterclockwise)

Preceding gene: 218709754

Following gene: 218709749

Centisome position: 57.22

GC content: 48.24

Gene sequence:

>2388_bases
ATGAAATTCAGTGAATCTTGGCTACGCGAGTGGGTTAAACCTGCAATTAACAGCGAAGAGCTAGCTCACCAAATCACTAT
GGCTGGTTTGGAAGTTGACGATGTAGAACCTGTTGCTGGTGAATTCACCGGCGTTAAAGTAGGTAAAGTGGTTGAGTGCG
GTCAGCACCCAGACGCAGACAAACTACAAGTAACTAAAATTGATATCGGCGAAGAAGAGCTGTTAGACATCGTTTGTGGT
GCATCTAACTGTCGTCTTGGCCTAACTGTGGCAGTAGCAACAGTTGGCGCAGTACTTCCTGGTGACTTCAAAATCAAGAA
AGCAAAACTACGTGGCGTTCCATCGCACGGCATGCTTTGTTCTTTCTCTGAGCTAGGCATCGACGTAGAGTCTGACGGTA
TCCTTGAGCTGCCAGAAGGTACAACACTAGGTATGGACGTACGTGAGCTTCTTGAGCTTAACGACGTAACTATCGACGTA
GACCTAACAGCAAACCGCGCAGACTGCTTCAGCATCCGTGGCCTTGCTCGTGAAGTTGGTGTACTAAACCGCGCAGACGT
TACAGAGCCAACAGTTGAAGCTGTTGCAACAAGCATTGAAGACACAGTATCTGTTGAAATCAAAGCAACTGATGCTTGTC
CACGTTACCTTGGCCGTGTGGTTAAGAACGTAAACGTGAAAGCGGAATCTCCAATCTGGATGCAAGAAAAACTGCGCCGT
TGTGGTATCCGTTCAATCGACCCAGTTGTAGACATCACAAACTACGTGATGCTAGAGCAAGGCCAACCAATGCACGCATT
TGATCTTGCTAAGATCGAAGGCGGTATCGTGGTTCGTCTAGCAGAGCAGGGCGAAAAGCTAACACTTCTAGATGGCAACG
AAGCTGAACTAAACAGCAACACACTTGTTATCGCTGACCAAAACAAAGCACTAGCAATCGCTGGTATCTTTGGCGGTCAA
GATTCAGGTGTTACTACTGAAACAACAGACGTACTTCTTGAAGCAGCATTCTTCGCACCGGATCACATCCGTGGTCGCGC
ACGTGCTTACGGCCTTCACACAGATTCTTCTCTACGTTTCGAACGTGGTGTTGATTCAACGCTACAAGCAGCAGCAATGG
AGCGTGCAACACAGCTTCTAGTTGAAATTTGTGGTGGTGAAGTTGCGCCAGTAAACGGCAGCGAATCTGAAGCTGATCTT
CCTAAAGCAAACGTAGTTGCTCTACGTCGCGCTAAGCTAGACAGCCTACTAGGTCACGAAATCCCATCTACAGACGTAGT
GGAAATTCTTACTCGCCTAGGTTGTGAAGTTGAGACGACTGAAGCTGGCTGGACGGCAACGTCTCCATCTTGGCGTTTTG
ATATCGCAATCGAGCAAGACCTAATTGAAGAAGTAGGTCGTATCTACGGTTACGATAACATTCCAAACCAAGCGCCTAAA
GCGGCACTTAAAATGAATGACCACAAAGAAGCGAACCAACCGCTTAAGCGCGTTCGTGACCTTCTTGTAGACCGTGGCTA
CCACGAAGCAATCACATACAGCTTCGTAGAACCAGAGCAGCAAAAACTTGTTGTACCTGGTGTTGAGCCGCTAATCCTGC
CATTCCCGATCTCTGCGGACATGTCAGCAATGCGTCTTGGCCTAATCCAAGGTCTTCTAAACACAGTGGTTCACAACCAG
AAGCGTCAACAGTCTCGCGTTCGTCTATTCGAATCAGGCCTACGTTTCATCCCTGAAGCAACAGCTGAAAACGGCATGCG
CCAAGAAATGATGCTTGCGGGCGTTATCTCTGGTACTCGTGGCGAAGAGCACTGGGACATTGCAACTAACACTGTAGATT
TCTTCGATCTTAAAGGTGACCTAGAAGCAGTTCTTGAGCTTTCTGCAAACGAAATCGCATACAGCTTCAAAGCAGCTAAG
CACCCAGCACTTCACCCAGGTCAAACTGCGGCTATCGTAGTAGACGGCAAAGAAGTGGGTATCATTGGTACTGTTCACCC
AGAACTAGAGCGTAAGTTTGGTCTTAACGGCCGCACTATCGTATTCGAAATCGAATGGGCAGCTATCAACACTCGCGTGC
TTCCAGAAGCAGTAGCAGTATCTAAGTTCCCTGCAAACCGTCGTGATATCGCAGTAGTTGTTGACGAAGCAGTCGCTTCT
GGCGACATCGTAGACGCGTGTATCGCAGCTGGTGGCGAATTCCTAACAGGCGCTAAACTGTTCGACGTATACGTTGGTCA
AGGCGTTGAAGAAGGTAAGAAGAGCCTAGCAATCGCACTTAGCCTACAGTCTGTAGAGCGCACACTTGAAGATGCAGACA
TCGCTGGTTCAGTAGATGCTATCGTAGCTTCAATCTCAGAGAAATTCGGCGCAGCACTTCGCGACTAA

Upstream 100 bases:

>100_bases
TCTAACGATGCTTCGTTACGGCGTAAATGACCTTCGTGCGTTCTTCGAGAACGACCTTCGTTTCCTTAAACAATTCAAGT
AATCCGGGGCAGTCGAAACT

Downstream 100 bases:

>100_bases
TTTCTTCTGATAGAGTGAAAACCAAAGGCCTCGCATTGCGAGGCCTTTTTTGTTTGAAGTGACGTTGTTTCAAACCCCTT
TTTGTGATGGTGCCTATATT

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MKFSESWLREWVKPAINSEELAHQITMAGLEVDDVEPVAGEFTGVKVGKVVECGQHPDADKLQVTKIDIGEEELLDIVCG
ASNCRLGLTVAVATVGAVLPGDFKIKKAKLRGVPSHGMLCSFSELGIDVESDGILELPEGTTLGMDVRELLELNDVTIDV
DLTANRADCFSIRGLAREVGVLNRADVTEPTVEAVATSIEDTVSVEIKATDACPRYLGRVVKNVNVKAESPIWMQEKLRR
CGIRSIDPVVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDGNEAELNSNTLVIADQNKALAIAGIFGGQ
DSGVTTETTDVLLEAAFFAPDHIRGRARAYGLHTDSSLRFERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADL
PKANVVALRRAKLDSLLGHEIPSTDVVEILTRLGCEVETTEAGWTATSPSWRFDIAIEQDLIEEVGRIYGYDNIPNQAPK
AALKMNDHKEANQPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPGVEPLILPFPISADMSAMRLGLIQGLLNTVVHNQ
KRQQSRVRLFESGLRFIPEATAENGMRQEMMLAGVISGTRGEEHWDIATNTVDFFDLKGDLEAVLELSANEIAYSFKAAK
HPALHPGQTAAIVVDGKEVGIIGTVHPELERKFGLNGRTIVFEIEWAAINTRVLPEAVAVSKFPANRRDIAVVVDEAVAS
GDIVDACIAAGGEFLTGAKLFDVYVGQGVEEGKKSLAIALSLQSVERTLEDADIAGSVDAIVASISEKFGAALRD

Sequences:

>Translated_795_residues
MKFSESWLREWVKPAINSEELAHQITMAGLEVDDVEPVAGEFTGVKVGKVVECGQHPDADKLQVTKIDIGEEELLDIVCG
ASNCRLGLTVAVATVGAVLPGDFKIKKAKLRGVPSHGMLCSFSELGIDVESDGILELPEGTTLGMDVRELLELNDVTIDV
DLTANRADCFSIRGLAREVGVLNRADVTEPTVEAVATSIEDTVSVEIKATDACPRYLGRVVKNVNVKAESPIWMQEKLRR
CGIRSIDPVVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDGNEAELNSNTLVIADQNKALAIAGIFGGQ
DSGVTTETTDVLLEAAFFAPDHIRGRARAYGLHTDSSLRFERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADL
PKANVVALRRAKLDSLLGHEIPSTDVVEILTRLGCEVETTEAGWTATSPSWRFDIAIEQDLIEEVGRIYGYDNIPNQAPK
AALKMNDHKEANQPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPGVEPLILPFPISADMSAMRLGLIQGLLNTVVHNQ
KRQQSRVRLFESGLRFIPEATAENGMRQEMMLAGVISGTRGEEHWDIATNTVDFFDLKGDLEAVLELSANEIAYSFKAAK
HPALHPGQTAAIVVDGKEVGIIGTVHPELERKFGLNGRTIVFEIEWAAINTRVLPEAVAVSKFPANRRDIAVVVDEAVAS
GDIVDACIAAGGEFLTGAKLFDVYVGQGVEEGKKSLAIALSLQSVERTLEDADIAGSVDAIVASISEKFGAALRD
>Mature_795_residues
MKFSESWLREWVKPAINSEELAHQITMAGLEVDDVEPVAGEFTGVKVGKVVECGQHPDADKLQVTKIDIGEEELLDIVCG
ASNCRLGLTVAVATVGAVLPGDFKIKKAKLRGVPSHGMLCSFSELGIDVESDGILELPEGTTLGMDVRELLELNDVTIDV
DLTANRADCFSIRGLAREVGVLNRADVTEPTVEAVATSIEDTVSVEIKATDACPRYLGRVVKNVNVKAESPIWMQEKLRR
CGIRSIDPVVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDGNEAELNSNTLVIADQNKALAIAGIFGGQ
DSGVTTETTDVLLEAAFFAPDHIRGRARAYGLHTDSSLRFERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADL
PKANVVALRRAKLDSLLGHEIPSTDVVEILTRLGCEVETTEAGWTATSPSWRFDIAIEQDLIEEVGRIYGYDNIPNQAPK
AALKMNDHKEANQPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPGVEPLILPFPISADMSAMRLGLIQGLLNTVVHNQ
KRQQSRVRLFESGLRFIPEATAENGMRQEMMLAGVISGTRGEEHWDIATNTVDFFDLKGDLEAVLELSANEIAYSFKAAK
HPALHPGQTAAIVVDGKEVGIIGTVHPELERKFGLNGRTIVFEIEWAAINTRVLPEAVAVSKFPANRRDIAVVVDEAVAS
GDIVDACIAAGGEFLTGAKLFDVYVGQGVEEGKKSLAIALSLQSVERTLEDADIAGSVDAIVASISEKFGAALRD

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI124028525, Length=567, Percent_Identity=23.1040564373898, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1788006, Length=795, Percent_Identity=62.0125786163522, Blast_Score=1004, Evalue=0.0,
Organism=Drosophila melanogaster, GI21355211, Length=558, Percent_Identity=22.9390681003584, Blast_Score=91, Evalue=3e-18,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 85948; Mature: 85948

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSESWLREWVKPAINSEELAHQITMAGLEVDDVEPVAGEFTGVKVGKVVECGQHPDAD
CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCC
KLQVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLPGDFKIKKAKLRGVPSHGMLC
CEEEEEECCCHHHHHHHHCCCCCCCEEHEEHHHHHHHCCCCCCEEEEHHHCCCCCCCCEE
SFSELGIDVESDGILELPEGTTLGMDVRELLELNDVTIDVDLTANRADCFSIRGLAREVG
EHHHHCCEECCCCEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHC
VLNRADVTEPTVEAVATSIEDTVSVEIKATDACPRYLGRVVKNVNVKAESPIWMQEKLRR
CCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
CGIRSIDPVVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDGNEAELNSN
CCCCCCCHHHHHHCEEEECCCCCCCCEEHEEECCCEEEEEECCCCEEEEECCCCCCCCCC
TLVIADQNKALAIAGIFGGQDSGVTTETTDVLLEAAFFAPDHIRGRARAYGLHTDSSLRF
EEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCH
ERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADLPKANVVALRRAKLDSLLGHE
HCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
IPSTDVVEILTRLGCEVETTEAGWTATSPSWRFDIAIEQDLIEEVGRIYGYDNIPNQAPK
CCCHHHHHHHHHCCCEEEECCCCCEECCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCH
AALKMNDHKEANQPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPGVEPLILPFPISAD
HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCEEECCCCCCEEEECCCCCC
MSAMRLGLIQGLLNTVVHNQKRQQSRVRLFESGLRFIPEATAENGMRQEMMLAGVISGTR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCC
GEEHWDIATNTVDFFDLKGDLEAVLELSANEIAYSFKAAKHPALHPGQTAAIVVDGKEVG
CCCCCEEECCCEEEEECCCCHHHHHHHCHHHHEEHHHHCCCCCCCCCCEEEEEECCCEEE
IIGTVHPELERKFGLNGRTIVFEIEWAAINTRVLPEAVAVSKFPANRRDIAVVVDEAVAS
EEEECCHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECHHCC
GDIVDACIAAGGEFLTGAKLFDVYVGQGVEEGKKSLAIALSLQSVERTLEDADIAGSVDA
CHHHHHHHHCCCCHHCCHHHHHHHHCCCHHHCCCEEEEEEEHHHHHHHHHHCCCCCHHHH
IVASISEKFGAALRD
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFSESWLREWVKPAINSEELAHQITMAGLEVDDVEPVAGEFTGVKVGKVVECGQHPDAD
CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCC
KLQVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLPGDFKIKKAKLRGVPSHGMLC
CEEEEEECCCHHHHHHHHCCCCCCCEEHEEHHHHHHHCCCCCCEEEEHHHCCCCCCCCEE
SFSELGIDVESDGILELPEGTTLGMDVRELLELNDVTIDVDLTANRADCFSIRGLAREVG
EHHHHCCEECCCCEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHC
VLNRADVTEPTVEAVATSIEDTVSVEIKATDACPRYLGRVVKNVNVKAESPIWMQEKLRR
CCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHH
CGIRSIDPVVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDGNEAELNSN
CCCCCCCHHHHHHCEEEECCCCCCCCEEHEEECCCEEEEEECCCCEEEEECCCCCCCCCC
TLVIADQNKALAIAGIFGGQDSGVTTETTDVLLEAAFFAPDHIRGRARAYGLHTDSSLRF
EEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCH
ERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADLPKANVVALRRAKLDSLLGHE
HCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
IPSTDVVEILTRLGCEVETTEAGWTATSPSWRFDIAIEQDLIEEVGRIYGYDNIPNQAPK
CCCHHHHHHHHHCCCEEEECCCCCEECCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCH
AALKMNDHKEANQPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPGVEPLILPFPISAD
HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCEEECCCCCCEEEECCCCCC
MSAMRLGLIQGLLNTVVHNQKRQQSRVRLFESGLRFIPEATAENGMRQEMMLAGVISGTR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCC
GEEHWDIATNTVDFFDLKGDLEAVLELSANEIAYSFKAAKHPALHPGQTAAIVVDGKEVG
CCCCCEEECCCEEEEECCCCHHHHHHHCHHHHEEHHHHCCCCCCCCCCEEEEEECCCEEE
IIGTVHPELERKFGLNGRTIVFEIEWAAINTRVLPEAVAVSKFPANRRDIAVVVDEAVAS
EEEECCHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHHHHCCCCCCCCEEEEEECHHCC
GDIVDACIAAGGEFLTGAKLFDVYVGQGVEEGKKSLAIALSLQSVERTLEDADIAGSVDA
CHHHHHHHHCCCCHHCCHHHHHHHHCCCHHHCCCEEEEEEEHHHHHHHHHHCCCCCHHHH
IVASISEKFGAALRD
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA