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The map label for this gene is 218709719

Identifier: 218709719

GI number: 218709719

Start: 1859466

End: 1859981

Strand: Reverse

Name: 218709719

Synonym: VS_1730

Alternate gene names: NA

Gene position: 1859981-1859466 (Counterclockwise)

Preceding gene: 218709720

Following gene: 218709718

Centisome position: 56.37

GC content: 43.02

Gene sequence:

>516_bases
ATGTCTGTATCGAAACCAGACAACAGAAGCTATATGAAGCGAGGAGAGATCAATATGAACAAGAGAATGATTCACAAGAG
ATTGGTGAGCCTACTGTGCACTACAACCGTTTTACTTAGTACCCACGCTTGGGCATCACAAGATCATTCGAACCAAATTG
AACAGCGCCAATACGCATTTACACAAGTTGAAACCTTGATTGAGCAAGCCAAAGACTTATTAGATGGCAACGATACGAGT
TGGCAGGTATTAGAAGAAACGAGTTTAGAGTTAACAGCTCATAGCGAATTGTTACTGACGTCATTTCCGGTGGGCAGCCA
AGAGGGAAGTAAAGCTAAAGAGAGTGTGTGGAGTGAGCCTGAAAAATTCGAACGACTACTAAGTCAAATGAATCAAGGGT
TCCAAGAACTCTATCAAGGTAGCCAACAAGGTGATGTATCACTGGTGGAATCAGGATTAAAAGCAGCGCAGGCGACTTGC
AAAAGTTGCCATCGTTCATATCGCTCACGTTGGTAA

Upstream 100 bases:

>100_bases
TGTAAATTGACTTTATCAAGGAAACACAGGCATCAAAGAAACACAGACATCAAAGAAACACAGACATCAGAGCAAAACGG
AACACCGAAACGAATCATCG

Downstream 100 bases:

>100_bases
TAACATTCAGTCCGCTCAATTAACTAACTAACTAACCCCATTTAACCAGTTAAAACTATTTAGCCCAAAAGGTACAAAAT
ATGAAAATGAGTATGTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSVSKPDNRSYMKRGEINMNKRMIHKRLVSLLCTTTVLLSTHAWASQDHSNQIEQRQYAFTQVETLIEQAKDLLDGNDTS
WQVLEETSLELTAHSELLLTSFPVGSQEGSKAKESVWSEPEKFERLLSQMNQGFQELYQGSQQGDVSLVESGLKAAQATC
KSCHRSYRSRW

Sequences:

>Translated_171_residues
MSVSKPDNRSYMKRGEINMNKRMIHKRLVSLLCTTTVLLSTHAWASQDHSNQIEQRQYAFTQVETLIEQAKDLLDGNDTS
WQVLEETSLELTAHSELLLTSFPVGSQEGSKAKESVWSEPEKFERLLSQMNQGFQELYQGSQQGDVSLVESGLKAAQATC
KSCHRSYRSRW
>Mature_170_residues
SVSKPDNRSYMKRGEINMNKRMIHKRLVSLLCTTTVLLSTHAWASQDHSNQIEQRQYAFTQVETLIEQAKDLLDGNDTSW
QVLEETSLELTAHSELLLTSFPVGSQEGSKAKESVWSEPEKFERLLSQMNQGFQELYQGSQQGDVSLVESGLKAAQATCK
SCHRSYRSRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19487; Mature: 19356

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51009 CYTCII

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSKPDNRSYMKRGEINMNKRMIHKRLVSLLCTTTVLLSTHAWASQDHSNQIEQRQYAF
CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TQVETLIEQAKDLLDGNDTSWQVLEETSLELTAHSELLLTSFPVGSQEGSKAKESVWSEP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCH
EKFERLLSQMNQGFQELYQGSQQGDVSLVESGLKAAQATCKSCHRSYRSRW
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVSKPDNRSYMKRGEINMNKRMIHKRLVSLLCTTTVLLSTHAWASQDHSNQIEQRQYAF
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TQVETLIEQAKDLLDGNDTSWQVLEETSLELTAHSELLLTSFPVGSQEGSKAKESVWSEP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCH
EKFERLLSQMNQGFQELYQGSQQGDVSLVESGLKAAQATCKSCHRSYRSRW
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA