Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709720

Identifier: 218709720

GI number: 218709720

Start: 1859863

End: 1860102

Strand: Reverse

Name: 218709720

Synonym: VS_1731

Alternate gene names: NA

Gene position: 1860102-1859863 (Counterclockwise)

Preceding gene: 218709722

Following gene: 218709719

Centisome position: 56.38

GC content: 39.58

Gene sequence:

>240_bases
TTGCAATTGCAACTATTGCTGTGTAAATTGACTTTATCAAGGAAACACAGGCATCAAAGAAACACAGACATCAAAGAAAC
ACAGACATCAGAGCAAAACGGAACACCGAAACGAATCATCGATGTCTGTATCGAAACCAGACAACAGAAGCTATATGAAG
CGAGGAGAGATCAATATGAACAAGAGAATGATTCACAAGAGATTGGTGAGCCTACTGTGCACTACAACCGTTTTACTTAG

Upstream 100 bases:

>100_bases
ATGGTATAGGCGAGTTGATAGATCCCAAATCTTCATAGTTTCACTCTCTCTTTTGTTTATTTAATCTCTGTTCGCTTTAC
AGTAATTTACACAGCAATAG

Downstream 100 bases:

>100_bases
TACCCACGCTTGGGCATCACAAGATCATTCGAACCAAATTGAACAGCGCCAATACGCATTTACACAAGTTGAAACCTTGA
TTGAGCAAGCCAAAGACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MQLQLLLCKLTLSRKHRHQRNTDIKETQTSEQNGTPKRIIDVCIETRQQKLYEARRDQYEQENDSQEIGEPTVHYNRFT

Sequences:

>Translated_79_residues
MQLQLLLCKLTLSRKHRHQRNTDIKETQTSEQNGTPKRIIDVCIETRQQKLYEARRDQYEQENDSQEIGEPTVHYNRFT
>Mature_79_residues
MQLQLLLCKLTLSRKHRHQRNTDIKETQTSEQNGTPKRIIDVCIETRQQKLYEARRDQYEQENDSQEIGEPTVHYNRFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9531; Mature: 9531

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQLLLCKLTLSRKHRHQRNTDIKETQTSEQNGTPKRIIDVCIETRQQKLYEARRDQYE
CCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QENDSQEIGEPTVHYNRFT
CCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQLQLLLCKLTLSRKHRHQRNTDIKETQTSEQNGTPKRIIDVCIETRQQKLYEARRDQYE
CCHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QENDSQEIGEPTVHYNRFT
CCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA