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The map label for this gene is oruR [H]

Identifier: 218709699

GI number: 218709699

Start: 1836909

End: 1837943

Strand: Reverse

Name: oruR [H]

Synonym: VS_1710

Alternate gene names: 218709699

Gene position: 1837943-1836909 (Counterclockwise)

Preceding gene: 218709707

Following gene: 218709696

Centisome position: 55.71

GC content: 46.57

Gene sequence:

>1035_bases
TTGGAGATTATCGCGGAGTATAAGCCGACCGGACATCGGCATCAATTGGGTACATTAGATATCGCGCTGCTGTTGAATAC
GTTAGAGCAACGAGGTCTCGATATTGAAAGGCTACTCAATGATGTGGGTTTGCCGAACATGGATTGGCGAGACCCGAATG
GAAAGCTGACTTACGCTGACAAACTTTCGTTATTTAGCGCGGCGAATCAGAGCTTTCCTCACGATGGCTTAGGGCTTTGG
CTGGGGGAACACGCTAGCTTGAGCCACTTTGGTGTGTTGGGTTATGCGCTATCGACAAGTCAAAATGTTGGGGAGGCCAT
CAAGTCGGGCTTTAAATATCTGCGCCTGAACGGTCCTATTTTCTCGGTTAAATTATTTCTAGATTCCGAGCAAGCAGTGA
TTCAGATTGAGAACACCTTGGAAGTGGGCGATCTCCTACCTTTCTGCAGTGAGTATTTCTTGAGTTCAATCGTCTCTTTG
TTCGAAGAACTGACTGGTCATGAGTTGGATATTCATACTTTGGCTTTGCCTTATGCTCGCCCTAATTACACCAAGCTTTA
TGACGAGCGTTTCCAGTGCCCGGTGATTTTTGAACAAAACTATTGTGAACTGCGTTTTGATGTCTCCGTTTTATCACAAA
CTTTATTGACTCATGATGCCGCGACCCTGAAGCGCTATCTCGCGTCTTGCCAGTCGATAGTGGAAACGCTGGACTCTGAG
CACCTGCTGACTAACCAGATCAAAACGATCTTTTATCAAACCGCAGGCAGTTTCCCGAATATAGAACAACTCGCGGATGA
GTTTGGTTGTAGCTCTCGTACACTCAGGCGAGAGCTAGTGACCCATGATTCCAGTTATCAAATATTGCTTACCGAAGTTA
GAGTGGAACTGGCCAAAGAGCTGTTACTCGGCACAACCATGAGTATCGATGACATCGGTGAAAGGCTCGGTTATAGCGAC
CCGGCAAATTTCAGAAGGGCGTTTAAAGGTTGGCTCAATAAAACGCCCGCTCAGTTTCGTGACGGTTTAAGTTAA

Upstream 100 bases:

>100_bases
ATTCGGACAATAGCGCGTTACCAATCACGATTTTGTCAGTAGTGTTGTTGAAGCTGAGTAGTCATGTTGATGGGAATGGG
CTCGATATAAGGAGAGACGA

Downstream 100 bases:

>100_bases
AGCGTTACTTGCTAAAAAACTGCTCCCTGAAATCGGTGACTTGCTGTTGATAATAACGGTCCCAATCTTGTTGAGTCCAA
GTGGCATAACTCGAGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MEIIAEYKPTGHRHQLGTLDIALLLNTLEQRGLDIERLLNDVGLPNMDWRDPNGKLTYADKLSLFSAANQSFPHDGLGLW
LGEHASLSHFGVLGYALSTSQNVGEAIKSGFKYLRLNGPIFSVKLFLDSEQAVIQIENTLEVGDLLPFCSEYFLSSIVSL
FEELTGHELDIHTLALPYARPNYTKLYDERFQCPVIFEQNYCELRFDVSVLSQTLLTHDAATLKRYLASCQSIVETLDSE
HLLTNQIKTIFYQTAGSFPNIEQLADEFGCSSRTLRRELVTHDSSYQILLTEVRVELAKELLLGTTMSIDDIGERLGYSD
PANFRRAFKGWLNKTPAQFRDGLS

Sequences:

>Translated_344_residues
MEIIAEYKPTGHRHQLGTLDIALLLNTLEQRGLDIERLLNDVGLPNMDWRDPNGKLTYADKLSLFSAANQSFPHDGLGLW
LGEHASLSHFGVLGYALSTSQNVGEAIKSGFKYLRLNGPIFSVKLFLDSEQAVIQIENTLEVGDLLPFCSEYFLSSIVSL
FEELTGHELDIHTLALPYARPNYTKLYDERFQCPVIFEQNYCELRFDVSVLSQTLLTHDAATLKRYLASCQSIVETLDSE
HLLTNQIKTIFYQTAGSFPNIEQLADEFGCSSRTLRRELVTHDSSYQILLTEVRVELAKELLLGTTMSIDDIGERLGYSD
PANFRRAFKGWLNKTPAQFRDGLS
>Mature_344_residues
MEIIAEYKPTGHRHQLGTLDIALLLNTLEQRGLDIERLLNDVGLPNMDWRDPNGKLTYADKLSLFSAANQSFPHDGLGLW
LGEHASLSHFGVLGYALSTSQNVGEAIKSGFKYLRLNGPIFSVKLFLDSEQAVIQIENTLEVGDLLPFCSEYFLSSIVSL
FEELTGHELDIHTLALPYARPNYTKLYDERFQCPVIFEQNYCELRFDVSVLSQTLLTHDAATLKRYLASCQSIVETLDSE
HLLTNQIKTIFYQTAGSFPNIEQLADEFGCSSRTLRRELVTHDSSYQILLTEVRVELAKELLLGTTMSIDDIGERLGYSD
PANFRRAFKGWLNKTPAQFRDGLS

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38823; Mature: 38823

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIAEYKPTGHRHQLGTLDIALLLNTLEQRGLDIERLLNDVGLPNMDWRDPNGKLTYAD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEHH
KLSLFSAANQSFPHDGLGLWLGEHASLSHFGVLGYALSTSQNVGEAIKSGFKYLRLNGPI
HHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCE
FSVKLFLDSEQAVIQIENTLEVGDLLPFCSEYFLSSIVSLFEELTGHELDIHTLALPYAR
EEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
PNYTKLYDERFQCPVIFEQNYCELRFDVSVLSQTLLTHDAATLKRYLASCQSIVETLDSE
CCHHHHHHHCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HLLTNQIKTIFYQTAGSFPNIEQLADEFGCSSRTLRRELVTHDSSYQILLTEVRVELAKE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
LLLGTTMSIDDIGERLGYSDPANFRRAFKGWLNKTPAQFRDGLS
HHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MEIIAEYKPTGHRHQLGTLDIALLLNTLEQRGLDIERLLNDVGLPNMDWRDPNGKLTYAD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEHH
KLSLFSAANQSFPHDGLGLWLGEHASLSHFGVLGYALSTSQNVGEAIKSGFKYLRLNGPI
HHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCE
FSVKLFLDSEQAVIQIENTLEVGDLLPFCSEYFLSSIVSLFEELTGHELDIHTLALPYAR
EEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
PNYTKLYDERFQCPVIFEQNYCELRFDVSVLSQTLLTHDAATLKRYLASCQSIVETLDSE
CCHHHHHHHCCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HLLTNQIKTIFYQTAGSFPNIEQLADEFGCSSRTLRRELVTHDSSYQILLTEVRVELAKE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
LLLGTTMSIDDIGERLGYSDPANFRRAFKGWLNKTPAQFRDGLS
HHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]