Click here to switch to the map view.

The map label for this gene is 218709673

Identifier: 218709673

GI number: 218709673

Start: 1810084

End: 1810650

Strand: Direct

Name: 218709673

Synonym: VS_1684

Alternate gene names: NA

Gene position: 1810084-1810650 (Clockwise)

Preceding gene: 218709672

Following gene: 218709675

Centisome position: 54.86

GC content: 42.86

Gene sequence:

>567_bases
ATGTCGAACACTCAAAGCTCAGATCTTCAAACCATCCATGACCAAGTAAAACAGTGGTTAGACGATGTCGTTATTGGCCT
AAACCTGTGTCCATTTGCAGCTAAGCCACAACGTAATAAACAGATTAAGATCTTTGTGAGTGAAGCGAAAACGGAAGAAG
CGTTACTAGAAGACATCATGACGCACTTTGTAGAATTAGATAACACGCCAGTCGCAGAATTAGAGACGACTTTGGTGGTT
GTGCCTAACATGCTGCAAGATTTCTTCGACTACAACATGTTCATTGATTGGATTGAAGCCTTGATCAAGCAAGAAGATTG
GGAAGGCGTTTATCAAGTGGCAACCTTCCATCCAGACTATTGCTTTGGTGGTGCGGATCCAGAAGACGATGAAAATCTTA
CTAACCGCTCTCCGTATCCGGTTTACCATTTGATTCGTGAAGCGAGTATGGAAAAAGTGTTGAAGCACTACCCCAACCCT
GAAACGATTCCTGATACCAACATCGCGAGAGTTGAATCTTTAACACCCGAAGAGCGTCGTAAGTTGTTCCCTTATCTATT
CAGTTAA

Upstream 100 bases:

>100_bases
CTCGCACAAGCATAAGTACGACCGAGGTTGTAACTCAATTATTGCTTTTGATTAACGTCCGTTCTGATATCCTACGCAAA
ATTTCATTTCGGAACCTGTT

Downstream 100 bases:

>100_bases
GAACTAACCTTTGAGCTTTAAGAGCTGACAGCTTCAACTTACGAGTCTGAGTGTTCTTGATGATATGGGCGAGATATAAA
CTGATCTCGTCCATTTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSNTQSSDLQTIHDQVKQWLDDVVIGLNLCPFAAKPQRNKQIKIFVSEAKTEEALLEDIMTHFVELDNTPVAELETTLVV
VPNMLQDFFDYNMFIDWIEALIKQEDWEGVYQVATFHPDYCFGGADPEDDENLTNRSPYPVYHLIREASMEKVLKHYPNP
ETIPDTNIARVESLTPEERRKLFPYLFS

Sequences:

>Translated_188_residues
MSNTQSSDLQTIHDQVKQWLDDVVIGLNLCPFAAKPQRNKQIKIFVSEAKTEEALLEDIMTHFVELDNTPVAELETTLVV
VPNMLQDFFDYNMFIDWIEALIKQEDWEGVYQVATFHPDYCFGGADPEDDENLTNRSPYPVYHLIREASMEKVLKHYPNP
ETIPDTNIARVESLTPEERRKLFPYLFS
>Mature_187_residues
SNTQSSDLQTIHDQVKQWLDDVVIGLNLCPFAAKPQRNKQIKIFVSEAKTEEALLEDIMTHFVELDNTPVAELETTLVVV
PNMLQDFFDYNMFIDWIEALIKQEDWEGVYQVATFHPDYCFGGADPEDDENLTNRSPYPVYHLIREASMEKVLKHYPNPE
TIPDTNIARVESLTPEERRKLFPYLFS

Specific function: Unknown

COG id: COG3310

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21842; Mature: 21711

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTQSSDLQTIHDQVKQWLDDVVIGLNLCPFAAKPQRNKQIKIFVSEAKTEEALLEDIM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHH
THFVELDNTPVAELETTLVVVPNMLQDFFDYNMFIDWIEALIKQEDWEGVYQVATFHPDY
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
CFGGADPEDDENLTNRSPYPVYHLIREASMEKVLKHYPNPETIPDTNIARVESLTPEERR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHH
KLFPYLFS
HHHHHHCC
>Mature Secondary Structure 
SNTQSSDLQTIHDQVKQWLDDVVIGLNLCPFAAKPQRNKQIKIFVSEAKTEEALLEDIM
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHH
THFVELDNTPVAELETTLVVVPNMLQDFFDYNMFIDWIEALIKQEDWEGVYQVATFHPDY
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
CFGGADPEDDENLTNRSPYPVYHLIREASMEKVLKHYPNPETIPDTNIARVESLTPEERR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHH
KLFPYLFS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA