| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709670
Identifier: 218709670
GI number: 218709670
Start: 1807491
End: 1807727
Strand: Direct
Name: 218709670
Synonym: VS_1681
Alternate gene names: NA
Gene position: 1807491-1807727 (Clockwise)
Preceding gene: 218709667
Following gene: 218709672
Centisome position: 54.78
GC content: 45.15
Gene sequence:
>237_bases ATGAAACGTGTTGTATTGTACGTCGCAGACAAATGCCCGCACTGTAAAGATGCACAGCGCTATTTGGATTCAAAGAAAAT TGTTTACCGCCTAACGAATGCAAAGATGCAGCGTGGTCGTAAAGAGTTGCAAGCTATGGGGGCTCGCTCTATCCCCGTAC TTAAAATCGGCGACCAGGTGATGGTCGGCTGGAATCAGAAGAACTTCGATAAGATGTATAACTCAAAGAGTACCTAA
Upstream 100 bases:
>100_bases GAGCCGCATAGTGTAACTGATCACACTTTTCTAATCACCTAGGATTCGTTACACTTTAGCGAGATTCACCAAGAGCTAGA CTCAAAAAGAGATTATAAAA
Downstream 100 bases:
>100_bases GTGCTCTAAGCCAGTAATACTTCTATATAATAAAGCCCGAATGTCCAATCTAGGATACTCGGGCTTTGTTGTTCTATACC ATTCTAAATCACACGTAGCG
Product: glutaredoxin-like protein
Products: NA
Alternate protein names: Glutaredoxin-Like Protein; Glutaredoxin Family Protein
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MKRVVLYVADKCPHCKDAQRYLDSKKIVYRLTNAKMQRGRKELQAMGARSIPVLKIGDQVMVGWNQKNFDKMYNSKST
Sequences:
>Translated_78_residues MKRVVLYVADKCPHCKDAQRYLDSKKIVYRLTNAKMQRGRKELQAMGARSIPVLKIGDQVMVGWNQKNFDKMYNSKST >Mature_78_residues MKRVVLYVADKCPHCKDAQRYLDSKKIVYRLTNAKMQRGRKELQAMGARSIPVLKIGDQVMVGWNQKNFDKMYNSKST
Specific function: Unknown
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9080; Mature: 9080
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVVLYVADKCPHCKDAQRYLDSKKIVYRLTNAKMQRGRKELQAMGARSIPVLKIGDQV CCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEE MVGWNQKNFDKMYNSKST EECCCCCCHHHHCCCCCC >Mature Secondary Structure MKRVVLYVADKCPHCKDAQRYLDSKKIVYRLTNAKMQRGRKELQAMGARSIPVLKIGDQV CCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEE MVGWNQKNFDKMYNSKST EECCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA