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The map label for this gene is yfjY [C]

Identifier: 218709645

GI number: 218709645

Start: 1788053

End: 1788523

Strand: Direct

Name: yfjY [C]

Synonym: VS_1655

Alternate gene names: 218709645

Gene position: 1788053-1788523 (Clockwise)

Preceding gene: 218709632

Following gene: 218709646

Centisome position: 54.19

GC content: 47.35

Gene sequence:

>471_bases
ATGAGAACACTTTCACCACCACTACTCTCACAGCAAGAGCATGAACATCGTGTTCTAGAAAAAGCCGCTGAGATATTAGA
AGATCGTTATGTACGAGGCGATGTATTTACCAACCCACAAGCTACCCGAGACTATTTGCGATTTAAGATTGGCGGCAGTG
AACGTGAAGTGTTCGCCGTCATGTTGCTAGATAACCAACACCGATTAATTGAGTTTGAGGAGTTGTTTCAAGGGACTATT
GATGCGGCAAGCGTCTATCCAAGGGAGGTAGTAAAGACTGCTCTGAAGGCCAATGCGGCAGCGGTTATCTTTGCTCATAA
CCATCCATCAGGCGACTCTGCGCCATCGCAAGCAGACAGGCGCATCACGACGAGATTGCAAGATGCTTTAGCGCTCATTG
ATGTTCGAGTTCTGGATCATGTTGTTGTCGGAGAACAATGCACATCGTTTGCAGAGAGGGGCTGGTTATGA

Upstream 100 bases:

>100_bases
TAAAAAAAATGAGGCTGGCTCGGCTTACTCTGATTCAAACCTTTTTGAGGTATATGTCATTAAAGTGAATTACCTAAAGC
CTGATTAAAGGAGAACCAAA

Downstream 100 bases:

>100_bases
TTGAGAAACACTATGGTGACCTCACCCTCAATAGCAAACTCCACCAGCAGTTAGAACAAACCATCGCTCGCTACTCGATC
CCTAAAGACACGACACGCAT

Product: putative DNA repair protein; prophage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRTLSPPLLSQQEHEHRVLEKAAEILEDRYVRGDVFTNPQATRDYLRFKIGGSEREVFAVMLLDNQHRLIEFEELFQGTI
DAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADRRITTRLQDALALIDVRVLDHVVVGEQCTSFAERGWL

Sequences:

>Translated_156_residues
MRTLSPPLLSQQEHEHRVLEKAAEILEDRYVRGDVFTNPQATRDYLRFKIGGSEREVFAVMLLDNQHRLIEFEELFQGTI
DAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADRRITTRLQDALALIDVRVLDHVVVGEQCTSFAERGWL
>Mature_156_residues
MRTLSPPLLSQQEHEHRVLEKAAEILEDRYVRGDVFTNPQATRDYLRFKIGGSEREVFAVMLLDNQHRLIEFEELFQGTI
DAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADRRITTRLQDALALIDVRVLDHVVVGEQCTSFAERGWL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=153, Percent_Identity=52.9411764705882, Blast_Score=149, Evalue=9e-38,
Organism=Escherichia coli, GI2367100, Length=143, Percent_Identity=52.4475524475524, Blast_Score=140, Evalue=4e-35,
Organism=Escherichia coli, GI1788312, Length=145, Percent_Identity=51.0344827586207, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI87082300, Length=120, Percent_Identity=49.1666666666667, Blast_Score=137, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17609; Mature: 17609

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLSPPLLSQQEHEHRVLEKAAEILEDRYVRGDVFTNPQATRDYLRFKIGGSEREVFAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEECCCCCEEEEE
MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADR
EEECCCCCEEEHHHHHCCCCCHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHH
RITTRLQDALALIDVRVLDHVVVGEQCTSFAERGWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTLSPPLLSQQEHEHRVLEKAAEILEDRYVRGDVFTNPQATRDYLRFKIGGSEREVFAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEECCCCCEEEEE
MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADR
EEECCCCCEEEHHHHHCCCCCHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHH
RITTRLQDALALIDVRVLDHVVVGEQCTSFAERGWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]