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The map label for this gene is alpA [C]

Identifier: 218709644

GI number: 218709644

Start: 1787719

End: 1787934

Strand: Reverse

Name: alpA [C]

Synonym: VS_1654

Alternate gene names: 218709644

Gene position: 1787934-1787719 (Counterclockwise)

Preceding gene: 218709652

Following gene: 218709643

Centisome position: 54.19

GC content: 44.44

Gene sequence:

>216_bases
ATGAGGACCACAGGCATAGGAGAACGTCCCATGAGATTTTTAAAGCTAAAAGAAGTGATTGAGAAAACTGCATTAAGCCG
CTCGGCGATATACAGAAAAATGGACGAAGGTAATTTTCCTGTATCGGTAAGCTTGGGAGATAGGGCGGTCGCTTGGGTAG
AAGAAGAGGTGAATAACTGGATGGAAATGCGCTTGGCTGAAAGACCAAGCCATTAA

Upstream 100 bases:

>100_bases
AGGCTTTAGGTAATTCACTTTAATGACATATACCTCAAAAAGGTTTGAATCAGAGTAAGCCGAGCCAGCCTCATTTTTTT
TAACACTATCTCCTTATCCC

Downstream 100 bases:

>100_bases
GACTGAATTAACGCCACTGCACCAATTAAGGCATTACCAAAATGGTAGGCCAAAACTCGAACAAAGGAGCAAGACCATGA
ATGAAGAAAACTGTGCAATC

Product: putative prophage protein; putative DNA-binding protein

Products: NA

Alternate protein names: Phage Transcriptional Regulator AlpA; Prophage Protein; Prophage Regulatory Protein

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MRTTGIGERPMRFLKLKEVIEKTALSRSAIYRKMDEGNFPVSVSLGDRAVAWVEEEVNNWMEMRLAERPSH

Sequences:

>Translated_71_residues
MRTTGIGERPMRFLKLKEVIEKTALSRSAIYRKMDEGNFPVSVSLGDRAVAWVEEEVNNWMEMRLAERPSH
>Mature_71_residues
MRTTGIGERPMRFLKLKEVIEKTALSRSAIYRKMDEGNFPVSVSLGDRAVAWVEEEVNNWMEMRLAERPSH

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8252; Mature: 8252

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTGIGERPMRFLKLKEVIEKTALSRSAIYRKMDEGNFPVSVSLGDRAVAWVEEEVNNW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHH
MEMRLAERPSH
HHHHHHCCCCC
>Mature Secondary Structure
MRTTGIGERPMRFLKLKEVIEKTALSRSAIYRKMDEGNFPVSVSLGDRAVAWVEEEVNNW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHH
MEMRLAERPSH
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA