| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218709625
Identifier: 218709625
GI number: 218709625
Start: 1754479
End: 1755477
Strand: Reverse
Name: 218709625
Synonym: VS_1635
Alternate gene names: NA
Gene position: 1755477-1754479 (Counterclockwise)
Preceding gene: 218709626
Following gene: 218709624
Centisome position: 53.21
GC content: 45.75
Gene sequence:
>999_bases ATGCACTACGACGTATTCAATGGAGACGCAGACGGCATCATCGCGTTGTTACAACTGCGATTAAGTGAACCGAGAAAAAG CGTGCTCGTCACCGGTGTAAAGCGTGATATTAAGTTGGTTTCTCAAGTTGCCAGTCAAATCATAGATCCGGGCACTCCAA ATGATGTCTCTTCCGTTACCGTTCTTGATGTGTCGATGGAGAAGAACCTGCCAGCATTGCACTCACTGTTAGATGCCAAC ATCGATGTGTTTTACTGCGATCACCATCGGACAGGGGACGTGCCAACCTCTGAGCATTTAGACACTCTGATAGACACCTC GGCAGAGAGTTGCACGAGTTTATTGATTAACCAGAAGCTAAATGGTGCACACGTAGCTTGGGCAATCGCGGCGGCCTTTG GTGATAATTTAAAAGTAGTGGCCGCACAGTTAGCTGATGAAAATGGATTCGAACAATCACAAATTGAGTTCTTAGAAGAG CTAGGTACCTTGGTTAATTACAACGGCTACGGCACATCATTGAGCGATCTACATTTCACGCCAGTTGAGCTCTACCAAAA CCTTTATCAATATCCGAACCCGTTCGATCTTATGGATGACAAAGACTCCGTGTTCTATCGACTACGAGCTGCTTACCAAA ATGACCGCCAGCAACTATCAAACCTTGCCCCTGTTTATGAAAGTAAAGTCGCACGTGTGTTTGAACTGCCCGGTGAGACT TGGGCAAGACGTATCAGCGGTGTATTTGGCAATGAGATCGTGAATCAAGATCCAAACCGAGCGCAAGCAGTATTAACGAA AAACCAAGATGGCGAATCTTATACTGTTAGCCTAAGAGCACCACTATCCAATAGAACAGGCGCAGATGAAATTTGCTCTA GCTTTGTAACTGGCGGAGGAAGAAAAGCAGCGGCTGGCATTAATCAACTTAGCGAACTTGATAGAGGGAATTTCATTTCA CTGTTGGACGCTTATTATTCGCCGAGTGTTGAGCGCTAA
Upstream 100 bases:
>100_bases ACTAAAATAATGACAGACTAACGATGAACGAACGCATTGACGTGAGCCATATCTTTGGCGCGTTTCAAATAAACGTTAAA TCTTACGGAAGAGGAATAGC
Downstream 100 bases:
>100_bases CGAAAATAGTAGCGAGAGTGAATAGGGTAAAGAGAGGCCATTTGGCTTCTTTTTTTGTGTCTAAAGTCACCCAAATAAGC CTTTCAAAAACTTAGTTAGC
Product: acetyltransferase
Products: NA
Alternate protein names: DHHA1 Domain Protein
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MHYDVFNGDADGIIALLQLRLSEPRKSVLVTGVKRDIKLVSQVASQIIDPGTPNDVSSVTVLDVSMEKNLPALHSLLDAN IDVFYCDHHRTGDVPTSEHLDTLIDTSAESCTSLLINQKLNGAHVAWAIAAAFGDNLKVVAAQLADENGFEQSQIEFLEE LGTLVNYNGYGTSLSDLHFTPVELYQNLYQYPNPFDLMDDKDSVFYRLRAAYQNDRQQLSNLAPVYESKVARVFELPGET WARRISGVFGNEIVNQDPNRAQAVLTKNQDGESYTVSLRAPLSNRTGADEICSSFVTGGGRKAAAGINQLSELDRGNFIS LLDAYYSPSVER
Sequences:
>Translated_332_residues MHYDVFNGDADGIIALLQLRLSEPRKSVLVTGVKRDIKLVSQVASQIIDPGTPNDVSSVTVLDVSMEKNLPALHSLLDAN IDVFYCDHHRTGDVPTSEHLDTLIDTSAESCTSLLINQKLNGAHVAWAIAAAFGDNLKVVAAQLADENGFEQSQIEFLEE LGTLVNYNGYGTSLSDLHFTPVELYQNLYQYPNPFDLMDDKDSVFYRLRAAYQNDRQQLSNLAPVYESKVARVFELPGET WARRISGVFGNEIVNQDPNRAQAVLTKNQDGESYTVSLRAPLSNRTGADEICSSFVTGGGRKAAAGINQLSELDRGNFIS LLDAYYSPSVER >Mature_332_residues MHYDVFNGDADGIIALLQLRLSEPRKSVLVTGVKRDIKLVSQVASQIIDPGTPNDVSSVTVLDVSMEKNLPALHSLLDAN IDVFYCDHHRTGDVPTSEHLDTLIDTSAESCTSLLINQKLNGAHVAWAIAAAFGDNLKVVAAQLADENGFEQSQIEFLEE LGTLVNYNGYGTSLSDLHFTPVELYQNLYQYPNPFDLMDDKDSVFYRLRAAYQNDRQQLSNLAPVYESKVARVFELPGET WARRISGVFGNEIVNQDPNRAQAVLTKNQDGESYTVSLRAPLSNRTGADEICSSFVTGGGRKAAAGINQLSELDRGNFIS LLDAYYSPSVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36552; Mature: 36552
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYDVFNGDADGIIALLQLRLSEPRKSVLVTGVKRDIKLVSQVASQIIDPGTPNDVSSVT CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE VLDVSMEKNLPALHSLLDANIDVFYCDHHRTGDVPTSEHLDTLIDTSAESCTSLLINQKL EEEECHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCC NGAHVAWAIAAAFGDNLKVVAAQLADENGFEQSQIEFLEELGTLVNYNGYGTSLSDLHFT CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCC PVELYQNLYQYPNPFDLMDDKDSVFYRLRAAYQNDRQQLSNLAPVYESKVARVFELPGET HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH WARRISGVFGNEIVNQDPNRAQAVLTKNQDGESYTVSLRAPLSNRTGADEICSSFVTGGG HHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCC RKAAAGINQLSELDRGNFISLLDAYYSPSVER CHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MHYDVFNGDADGIIALLQLRLSEPRKSVLVTGVKRDIKLVSQVASQIIDPGTPNDVSSVT CCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE VLDVSMEKNLPALHSLLDANIDVFYCDHHRTGDVPTSEHLDTLIDTSAESCTSLLINQKL EEEECHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCC NGAHVAWAIAAAFGDNLKVVAAQLADENGFEQSQIEFLEELGTLVNYNGYGTSLSDLHFT CCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCC PVELYQNLYQYPNPFDLMDDKDSVFYRLRAAYQNDRQQLSNLAPVYESKVARVFELPGET HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHH WARRISGVFGNEIVNQDPNRAQAVLTKNQDGESYTVSLRAPLSNRTGADEICSSFVTGGG HHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCC RKAAAGINQLSELDRGNFISLLDAYYSPSVER CHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA