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The map label for this gene is yggA [C]

Identifier: 218709619

GI number: 218709619

Start: 1747477

End: 1748076

Strand: Reverse

Name: yggA [C]

Synonym: VS_1629

Alternate gene names: 218709619

Gene position: 1748076-1747477 (Counterclockwise)

Preceding gene: 218709620

Following gene: 218709618

Centisome position: 52.98

GC content: 42.17

Gene sequence:

>600_bases
TTGATGCCGACTTATTTTGCAGGTTTTACTCTCGGGCTTTCGCTTATTCTCGCGATCGGTTCTCAAAATGCGTTCGTTCT
TAAACAGGGCTTAAAGAATCAGCATGTGTTTGCTATTTGTGCTGTCTGCGCGATTTCAGATGCATTACTGATCAGCTTTG
GTGTGATGGGCTTTGGTGCAATCGTTGATCAGTTTCCACAAATTGAGCAGTTTGCTCGTTACGGTGGGGCTATCTTTTTA
GGGGTTTACTCATTCTTGAGCTTTCGCTCAGCATTTACCGAAAATCATGCCTTAGAAGCCGGTGTCGAAACCAAAAACTC
TTTAACCAAAGCAGTTACCATGTGCTTAGCGTTTACTTGGCTTAATCCGCATGTGTATCTGGATACTGTGGTATTGCTGG
GTTCTATCTCTACACAATATCAACCAAATCAAATGTTGTTTGGTGCAGGTGCAGTATCGGCTTCATTCGTGTTCTTTTTT
TTACTTGGCTATGGTGCACGATTCTTAGCTCCAATGTTTAAGAACCCGAAATCATGGAAGATGTTGGAGTTTGTTGTAGG
AGTGATCATGGCATCTATTGCACTATCTTTGGTTGTTTAG

Upstream 100 bases:

>100_bases
ATCAAAAATTTGGCTTTGGTTACTGTGAACCTTTTGCTAATTATGTGTTAGACCCGCACAGTCATTTCATGAGTATTGAG
TTACGTTAAGAGGCTAACCT

Downstream 100 bases:

>100_bases
TTTTACTCTGCTTTCGTTAACTTCTCCTCATCAGTTGAACGCTGGTGGGGAAAGTACGGCTTGTTAGCTTGTTAGCTTGC
TAGCTCGTTAATTAGTAATT

Product: putative lysine exporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MMPTYFAGFTLGLSLILAIGSQNAFVLKQGLKNQHVFAICAVCAISDALLISFGVMGFGAIVDQFPQIEQFARYGGAIFL
GVYSFLSFRSAFTENHALEAGVETKNSLTKAVTMCLAFTWLNPHVYLDTVVLLGSISTQYQPNQMLFGAGAVSASFVFFF
LLGYGARFLAPMFKNPKSWKMLEFVVGVIMASIALSLVV

Sequences:

>Translated_199_residues
MMPTYFAGFTLGLSLILAIGSQNAFVLKQGLKNQHVFAICAVCAISDALLISFGVMGFGAIVDQFPQIEQFARYGGAIFL
GVYSFLSFRSAFTENHALEAGVETKNSLTKAVTMCLAFTWLNPHVYLDTVVLLGSISTQYQPNQMLFGAGAVSASFVFFF
LLGYGARFLAPMFKNPKSWKMLEFVVGVIMASIALSLVV
>Mature_199_residues
MMPTYFAGFTLGLSLILAIGSQNAFVLKQGLKNQHVFAICAVCAISDALLISFGVMGFGAIVDQFPQIEQFARYGGAIFL
GVYSFLSFRSAFTENHALEAGVETKNSLTKAVTMCLAFTWLNPHVYLDTVVLLGSISTQYQPNQMLFGAGAVSASFVFFF
LLGYGARFLAPMFKNPKSWKMLEFVVGVIMASIALSLVV

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=199, Percent_Identity=41.7085427135678, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21617; Mature: 21617

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPTYFAGFTLGLSLILAIGSQNAFVLKQGLKNQHVFAICAVCAISDALLISFGVMGFGA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVDQFPQIEQFARYGGAIFLGVYSFLSFRSAFTENHALEAGVETKNSLTKAVTMCLAFTW
HHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHH
LNPHVYLDTVVLLGSISTQYQPNQMLFGAGAVSASFVFFFLLGYGARFLAPMFKNPKSWK
CCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MLEFVVGVIMASIALSLVV
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMPTYFAGFTLGLSLILAIGSQNAFVLKQGLKNQHVFAICAVCAISDALLISFGVMGFGA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVDQFPQIEQFARYGGAIFLGVYSFLSFRSAFTENHALEAGVETKNSLTKAVTMCLAFTW
HHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHH
LNPHVYLDTVVLLGSISTQYQPNQMLFGAGAVSASFVFFFLLGYGARFLAPMFKNPKSWK
CCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MLEFVVGVIMASIALSLVV
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]