The gene/protein map for NC_011753 is currently unavailable.
Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218709607

Identifier: 218709607

GI number: 218709607

Start: 1732842

End: 1733975

Strand: Reverse

Name: 218709607

Synonym: VS_1617

Alternate gene names: NA

Gene position: 1733975-1732842 (Counterclockwise)

Preceding gene: 218709612

Following gene: 218709606

Centisome position: 52.56

GC content: 46.03

Gene sequence:

>1134_bases
ATGACAGCACTACTCACCATTCCCACTAGGACGTTAGGTTTCGACTACGATATTGAGATCCGAGATTGGTCTCAAAAGCT
TGTCGGCTTTCATGTGTTTGAAGATGGTCGACTCCCGCTCGACGGTGGCATTGGGCTGAGCCTAAACCTTGTTGAGCAGT
TTGATAAGAATGGTCGTTGGTTGGATTCATTGCCTGCTCGTTATCGTGAGATCACTGACGATTTTCCTGAGTATCAATAT
CAAATGCTATGGTTGGCTGCGAACACTTATGAGGCAGCAGCACAACTGCTTGAGTTAAGACCGGTTATCTTGGCGCTAAT
CTGCATGAAACACAGTGTCGATAACAAGAAAGCATTGGAACTGAGTCGCCTAGGACAAAAGAGAATCTTAGCCAAATTGG
GCTTAGACAGTAGTAAAGCGACCCTTAAATTTATCGATAAGCTAGAGCTGCATTACGACATCGGTGATGAGCTTGACCAC
ATTGTTCGCATTCTCGAGCCGCTGCAAAGACGTGTGCTCAAATTCAAACATTACTCTAAAGTAGGCTACACAGCGCTGCG
TTTGGATCAGGTTCATCCGTTTTTAACCGGCAGTCGATTAGGTATTGCAATGGTTGAAGAGGGAAGGCTCAATGCGCCTT
CAAAGATGGCCATGTTCCAAGACGCGATTTTACTGGGTCAAGATTTGGAGATGGACGATCCATTGCGTGCCATCACCAGT
CAAAATTCCTTTGCTATGTTTGAGCAACTGCATGATAGATGGACAGAACAGCGTCAGTTACGCCGTCTAGAAGGAAACCG
GCCTGTGGACATGGACATCCCTTATCCTGTTCCTTTACTTGGTAATGACAACATTCATCCGCTTACTGATTACTACGACC
TTGAGCAAGAGGGCGTGGAACAAAAACATTGTATTGGCGTCTATCACAATCGAATCATGAGCGACCGCTATGTGGTGTTT
CGAATGCTCAAGCCTCAGCGCTTAACCATTGGCCTACGTCGTGTTCCAAGCAAAGCCTTTCCGTTTGAAATTGACCAGAT
TTGTGGGAAACGAAATGCACCGCCATCCGAGTCTGCTCGCCAAGTTATTCATGATTGGTTAGAAGCGAGTAAGCAAAAGT
ATCCGAAGCAATAG

Upstream 100 bases:

>100_bases
TGATAAGAAATTTACAAAAGGTTGTTATAGTGGTTGAAGCGCTAGCTTATTCTGTTAGATAGGCTTTACGGTTTAATGCG
CCAATAACGAAGAGGCATCA

Downstream 100 bases:

>100_bases
CTGCGAACTAGAAGGAATAACAGGATGTTTCAACAAGGTGATTTATGCCCGCATTGTGGTTTGATTATTGTGATACCAAC
GGATTTGCAAGCCGAATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTALLTIPTRTLGFDYDIEIRDWSQKLVGFHVFEDGRLPLDGGIGLSLNLVEQFDKNGRWLDSLPARYREITDDFPEYQY
QMLWLAANTYEAAAQLLELRPVILALICMKHSVDNKKALELSRLGQKRILAKLGLDSSKATLKFIDKLELHYDIGDELDH
IVRILEPLQRRVLKFKHYSKVGYTALRLDQVHPFLTGSRLGIAMVEEGRLNAPSKMAMFQDAILLGQDLEMDDPLRAITS
QNSFAMFEQLHDRWTEQRQLRRLEGNRPVDMDIPYPVPLLGNDNIHPLTDYYDLEQEGVEQKHCIGVYHNRIMSDRYVVF
RMLKPQRLTIGLRRVPSKAFPFEIDQICGKRNAPPSESARQVIHDWLEASKQKYPKQ

Sequences:

>Translated_377_residues
MTALLTIPTRTLGFDYDIEIRDWSQKLVGFHVFEDGRLPLDGGIGLSLNLVEQFDKNGRWLDSLPARYREITDDFPEYQY
QMLWLAANTYEAAAQLLELRPVILALICMKHSVDNKKALELSRLGQKRILAKLGLDSSKATLKFIDKLELHYDIGDELDH
IVRILEPLQRRVLKFKHYSKVGYTALRLDQVHPFLTGSRLGIAMVEEGRLNAPSKMAMFQDAILLGQDLEMDDPLRAITS
QNSFAMFEQLHDRWTEQRQLRRLEGNRPVDMDIPYPVPLLGNDNIHPLTDYYDLEQEGVEQKHCIGVYHNRIMSDRYVVF
RMLKPQRLTIGLRRVPSKAFPFEIDQICGKRNAPPSESARQVIHDWLEASKQKYPKQ
>Mature_376_residues
TALLTIPTRTLGFDYDIEIRDWSQKLVGFHVFEDGRLPLDGGIGLSLNLVEQFDKNGRWLDSLPARYREITDDFPEYQYQ
MLWLAANTYEAAAQLLELRPVILALICMKHSVDNKKALELSRLGQKRILAKLGLDSSKATLKFIDKLELHYDIGDELDHI
VRILEPLQRRVLKFKHYSKVGYTALRLDQVHPFLTGSRLGIAMVEEGRLNAPSKMAMFQDAILLGQDLEMDDPLRAITSQ
NSFAMFEQLHDRWTEQRQLRRLEGNRPVDMDIPYPVPLLGNDNIHPLTDYYDLEQEGVEQKHCIGVYHNRIMSDRYVVFR
MLKPQRLTIGLRRVPSKAFPFEIDQICGKRNAPPSESARQVIHDWLEASKQKYPKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43687; Mature: 43556

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALLTIPTRTLGFDYDIEIRDWSQKLVGFHVFEDGRLPLDGGIGLSLNLVEQFDKNGRW
CCEEEECCCHHHCCCEEEEEHHHHHHHHEEEEEECCCCCCCCCCCCEEHHHHHHCCCCCC
LDSLPARYREITDDFPEYQYQMLWLAANTYEAAAQLLELRPVILALICMKHSVDNKKALE
HHHHHHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSRLGQKRILAKLGLDSSKATLKFIDKLELHYDIGDELDHIVRILEPLQRRVLKFKHYSK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGYTALRLDQVHPFLTGSRLGIAMVEEGRLNAPSKMAMFQDAILLGQDLEMDDPLRAITS
HCHHHEEHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHC
QNSFAMFEQLHDRWTEQRQLRRLEGNRPVDMDIPYPVPLLGNDNIHPLTDYYDLEQEGVE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCC
QKHCIGVYHNRIMSDRYVVFRMLKPQRLTIGLRRVPSKAFPFEIDQICGKRNAPPSESAR
HHHHHHHHHHHHHCCHHHEEECCCCCCEEHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHH
QVIHDWLEASKQKYPKQ
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TALLTIPTRTLGFDYDIEIRDWSQKLVGFHVFEDGRLPLDGGIGLSLNLVEQFDKNGRW
CEEEECCCHHHCCCEEEEEHHHHHHHHEEEEEECCCCCCCCCCCCEEHHHHHHCCCCCC
LDSLPARYREITDDFPEYQYQMLWLAANTYEAAAQLLELRPVILALICMKHSVDNKKALE
HHHHHHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSRLGQKRILAKLGLDSSKATLKFIDKLELHYDIGDELDHIVRILEPLQRRVLKFKHYSK
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGYTALRLDQVHPFLTGSRLGIAMVEEGRLNAPSKMAMFQDAILLGQDLEMDDPLRAITS
HCHHHEEHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHC
QNSFAMFEQLHDRWTEQRQLRRLEGNRPVDMDIPYPVPLLGNDNIHPLTDYYDLEQEGVE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCC
QKHCIGVYHNRIMSDRYVVFRMLKPQRLTIGLRRVPSKAFPFEIDQICGKRNAPPSESAR
HHHHHHHHHHHHHCCHHHEEECCCCCCEEHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHH
QVIHDWLEASKQKYPKQ
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA