Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709606

Identifier: 218709606

GI number: 218709606

Start: 1732159

End: 1732650

Strand: Reverse

Name: 218709606

Synonym: VS_1616

Alternate gene names: NA

Gene position: 1732650-1732159 (Counterclockwise)

Preceding gene: 218709607

Following gene: 218709605

Centisome position: 52.52

GC content: 39.23

Gene sequence:

>492_bases
ATGGCCAAATTACCCTTTCAAAGGATGGAAAAAATGCAGAAAGTAATCTTTAGAAATTGTGATGAAAGTTCGCCATATTG
GAGTGAATTAGAGTGCTTGTTTCAAAGTGAATGGTCGGATTTTAAGTTTAAAGATACCTATAAAGACTGCGTACAACTCC
CTCCAGTAATAGTAGTACTTCGCGATAATGTAGTCATTGGTGGCTTGGCATATTCCCATTTTCAAGAGCCTCATCAAGTT
CGGGATGTGGTTTGGATTAATGCTGTTTATGTTGATGCTCAATGGCGTGGCCAAGGTATTGCAAGTGAATTGATTAATCG
TGGTGTTGAACAAATGCCAGACTATTATCAATCCCAACCCTCGAAAGGTTCAACGTCTAAGTTGTACGCCTACACCAATA
TTGCGCCTTTGTATCTTTCTCTCGGTTGGTCAATCGTCGATATCGAATCAGAACCGAACCATAAAGTGATGAGTATTGAA
CTTAATCGATAA

Upstream 100 bases:

>100_bases
CCGAATGCTTGGGGTGTTGCGAAGAAATCAATGAAGATCCAGCCGACAGTTACGAAGAAGAAGAGTAGCTTTATCTACAC
TGATATAAACCAAGGCTAGG

Downstream 100 bases:

>100_bases
GTTCGGAATAAAAACTTTGATATTAGGTTATCTGCCTTTCGAGTAATGAAGCTCTCTCTTTCATCAACAATGCATAACTC
TGTTAAATTTTCGTTGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAKLPFQRMEKMQKVIFRNCDESSPYWSELECLFQSEWSDFKFKDTYKDCVQLPPVIVVLRDNVVIGGLAYSHFQEPHQV
RDVVWINAVYVDAQWRGQGIASELINRGVEQMPDYYQSQPSKGSTSKLYAYTNIAPLYLSLGWSIVDIESEPNHKVMSIE
LNR

Sequences:

>Translated_163_residues
MAKLPFQRMEKMQKVIFRNCDESSPYWSELECLFQSEWSDFKFKDTYKDCVQLPPVIVVLRDNVVIGGLAYSHFQEPHQV
RDVVWINAVYVDAQWRGQGIASELINRGVEQMPDYYQSQPSKGSTSKLYAYTNIAPLYLSLGWSIVDIESEPNHKVMSIE
LNR
>Mature_162_residues
AKLPFQRMEKMQKVIFRNCDESSPYWSELECLFQSEWSDFKFKDTYKDCVQLPPVIVVLRDNVVIGGLAYSHFQEPHQVR
DVVWINAVYVDAQWRGQGIASELINRGVEQMPDYYQSQPSKGSTSKLYAYTNIAPLYLSLGWSIVDIESEPNHKVMSIEL
NR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18946; Mature: 18815

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLPFQRMEKMQKVIFRNCDESSPYWSELECLFQSEWSDFKFKDTYKDCVQLPPVIVVL
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEE
RDNVVIGGLAYSHFQEPHQVRDVVWINAVYVDAQWRGQGIASELINRGVEQMPDYYQSQP
ECCEEEECCHHHHCCCHHHHHHEEEEEEEEEECCCCCCCHHHHHHHCCHHHCCHHHHCCC
SKGSTSKLYAYTNIAPLYLSLGWSIVDIESEPNHKVMSIELNR
CCCCCCEEEEECCHHEEHEECCCEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure 
AKLPFQRMEKMQKVIFRNCDESSPYWSELECLFQSEWSDFKFKDTYKDCVQLPPVIVVL
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEE
RDNVVIGGLAYSHFQEPHQVRDVVWINAVYVDAQWRGQGIASELINRGVEQMPDYYQSQP
ECCEEEECCHHHHCCCHHHHHHEEEEEEEEEECCCCCCCHHHHHHHCCHHHCCHHHHCCC
SKGSTSKLYAYTNIAPLYLSLGWSIVDIESEPNHKVMSIELNR
CCCCCCEEEEECCHHEEHEECCCEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA