Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709605

Identifier: 218709605

GI number: 218709605

Start: 1731661

End: 1731921

Strand: Reverse

Name: 218709605

Synonym: VS_1615

Alternate gene names: NA

Gene position: 1731921-1731661 (Counterclockwise)

Preceding gene: 218709606

Following gene: 218709602

Centisome position: 52.49

GC content: 44.06

Gene sequence:

>261_bases
ATGAACATGAGCGATACTAATTCAAGACCAGCTTTACCAGATCATCTTGCAGGTAACCCACGCAGCCCACACCACGTGGC
TGAGTGTTTCGAATACCCAATCGGCATTCGTCTAAATGGTAAAGAGCGTACTGATGTTGAAGAATACTGCATCAGCGAAG
GTTGGGTTAAGATCCCTTCTCCAAAAGCGCTAGATCGTTTTGGTCAGCCAATGCTTATTACTCTTAAAGGCACAGTAGAA
GCTTTCTACATCGAAGATTAA

Upstream 100 bases:

>100_bases
TTGATTAAAACGATCTCTACGATTTATTGCACCAGTTGTTGAGCACTAAGCCTATATTGACTAGAATGACGCACTTTTTT
TATTTACGTACATACAGGTA

Downstream 100 bases:

>100_bases
TCACTTCGTGTAACTCGATAATGTCGAGTACAAAACGCTGTTATATAGAAGGGTCTAGAGAAATCTAGGTCCTTTTTGTT
TGCGTATGATTCCTTGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPSPKALDRFGQPMLITLKGTVE
AFYIED

Sequences:

>Translated_86_residues
MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPSPKALDRFGQPMLITLKGTVE
AFYIED
>Mature_86_residues
MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPSPKALDRFGQPMLITLKGTVE
AFYIED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9702; Mature: 9702

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHCCCEEECCC
PKALDRFGQPMLITLKGTVEAFYIED
CHHHHHCCCCEEEEEECCEEEEEECC
>Mature Secondary Structure
MNMSDTNSRPALPDHLAGNPRSPHHVAECFEYPIGIRLNGKERTDVEEYCISEGWVKIPS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCHHHHHHCCCEEECCC
PKALDRFGQPMLITLKGTVEAFYIED
CHHHHHCCCCEEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA