| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709598
Identifier: 218709598
GI number: 218709598
Start: 1724797
End: 1725297
Strand: Reverse
Name: 218709598
Synonym: VS_1608
Alternate gene names: NA
Gene position: 1725297-1724797 (Counterclockwise)
Preceding gene: 218709599
Following gene: 218709597
Centisome position: 52.29
GC content: 41.72
Gene sequence:
>501_bases ATGAGCTTAACAATCAGAGAAGTCGCGGTAGAAGATGCACAAGGCATTATTGATGTATTGAATCCAATCATTATAGAAGC ACGTTATACGATCTTGGATCAGACTTTTACTGTTGATGAAGAAAAGGCATTCATTGAGTCGTTCCCGAAACGTGGTGTGT TTAACGTTGCAGTCAACGAAACGACCAATCAGTTACTTGGTTTTCAGAATGTAGAACCATTCGCTACTTACACTAAGGCC TTTGACCATGTTGGTATTATTGGCACTTATGTTGATGCAAATAGCCGTGGGCTGGGCGTTGCAAAACAGTTGTTCGATTA CACATTCAAATCAGCCAAAGCCAAAGGTTATGAAAAGCTGTTCGCCTATGTAAGAGCAGACAACGAGCGCGCGTTAGCGG TATACCTTAAGCAAGGTTTTGAAATCGTCGGTACGGCTAAGAAACACGGTAAGATTGGCGATCAGTACTTTGACGAGATC CTTATCGAGAAGTTTTTATAG
Upstream 100 bases:
>100_bases CGAACTCTACTTCGATATCGCCTTCGACAACATTCTGTCCTATCAAAAGGATGGCGCATAGCGATAGAATCTGCCCAAAG CAATAAAAAGGTAGAGAAGT
Downstream 100 bases:
>100_bases GCTCGCTTAAACACTAGATAATTCATCGTATGCAGGAGGCAAGATGACAAAGCTAATCGAATTAACAAAAATAGTCTTAT TCGACTGGGGCAATACGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family; Ribosomal-Protein-Alanine Acetyltransferase; N-Acetyltransferase
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSLTIREVAVEDAQGIIDVLNPIIIEARYTILDQTFTVDEEKAFIESFPKRGVFNVAVNETTNQLLGFQNVEPFATYTKA FDHVGIIGTYVDANSRGLGVAKQLFDYTFKSAKAKGYEKLFAYVRADNERALAVYLKQGFEIVGTAKKHGKIGDQYFDEI LIEKFL
Sequences:
>Translated_166_residues MSLTIREVAVEDAQGIIDVLNPIIIEARYTILDQTFTVDEEKAFIESFPKRGVFNVAVNETTNQLLGFQNVEPFATYTKA FDHVGIIGTYVDANSRGLGVAKQLFDYTFKSAKAKGYEKLFAYVRADNERALAVYLKQGFEIVGTAKKHGKIGDQYFDEI LIEKFL >Mature_165_residues SLTIREVAVEDAQGIIDVLNPIIIEARYTILDQTFTVDEEKAFIESFPKRGVFNVAVNETTNQLLGFQNVEPFATYTKAF DHVGIIGTYVDANSRGLGVAKQLFDYTFKSAKAKGYEKLFAYVRADNERALAVYLKQGFEIVGTAKKHGKIGDQYFDEIL IEKFL
Specific function: Unknown
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18674; Mature: 18543
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTIREVAVEDAQGIIDVLNPIIIEARYTILDQTFTVDEEKAFIESFPKRGVFNVAVNE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHCCCCCEEEEEECC TTNQLLGFQNVEPFATYTKAFDHVGIIGTYVDANSRGLGVAKQLFDYTFKSAKAKGYEKL HHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHH FAYVRADNERALAVYLKQGFEIVGTAKKHGKIGDQYFDEILIEKFL HHHHHCCCCCEEEHEEHHCCEEEECCHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SLTIREVAVEDAQGIIDVLNPIIIEARYTILDQTFTVDEEKAFIESFPKRGVFNVAVNE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHCCCCCEEEEEECC TTNQLLGFQNVEPFATYTKAFDHVGIIGTYVDANSRGLGVAKQLFDYTFKSAKAKGYEKL HHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHH FAYVRADNERALAVYLKQGFEIVGTAKKHGKIGDQYFDEILIEKFL HHHHHCCCCCEEEHEEHHCCEEEECCHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA