| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yjjG [C]
Identifier: 218709597
GI number: 218709597
Start: 1724247
End: 1724753
Strand: Reverse
Name: yjjG [C]
Synonym: VS_1607
Alternate gene names: 218709597
Gene position: 1724753-1724247 (Counterclockwise)
Preceding gene: 218709598
Following gene: 218709596
Centisome position: 52.28
GC content: 45.56
Gene sequence:
>507_bases ATGACAAAGCTAATCGAATTAACAAAAATAGTCTTATTCGACTGGGGCAATACGCTGATGGTCGATTTCCCAGACGCACA AGGGAAGATGTGTGACTGGGAAACCGTACAAGAAGTGAGTGGTGCTCGCGCATTACTTGCTGATCTATCGAAAACTCAAC AAGTTTATGTTGCCACCAACGCTGGTGATTCCAGTAAAGACGACATCATTCGAGCCTTTGAGCGTGTTGGCCTTTCTCAA TATATATTGGGTTACTTTTGTAAGGCGAGCATTGGCTTTTCTAAGTTCGATTCGGGCTTTTATCCTGCCATCATTTCCAA ACTCGGTGTAGCACCACAAGATATCACCATGGTGGGTGACACCTTAGACAAAGACATTTACCCAGCACTTGAAGCGGGTT TGAAAGCGGTGTGGTTGAACACGGAGGGCGCTGATCTTAAGTCAGGGCATCCGAATGTCATGCAAGTTCAATCCCTAAGC GAACTGTTGGAGAAGTACCATGGATGA
Upstream 100 bases:
>100_bases CACGGTAAGATTGGCGATCAGTACTTTGACGAGATCCTTATCGAGAAGTTTTTATAGGCTCGCTTAAACACTAGATAATT CATCGTATGCAGGAGGCAAG
Downstream 100 bases:
>100_bases TCACTCTGAGATCTGGCGTCAGTATTACCAAAAGGCACTAAGCAAACCTCATTTAAAGAGAACTGAGTACGCAATTAAAC TGAATGAGTCAGGCTTAAAT
Product: putative hydrolase
Products: NA
Alternate protein names: HAD Family Hydrolase; HAD Superfamily Hydrolase-Like
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATNAGDSSKDDIIRAFERVGLSQ YILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGDTLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLS ELLEKYHG
Sequences:
>Translated_168_residues MTKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATNAGDSSKDDIIRAFERVGLSQ YILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGDTLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLS ELLEKYHG >Mature_167_residues TKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATNAGDSSKDDIIRAFERVGLSQY ILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGDTLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLSE LLEKYHG
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18447; Mature: 18316
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATN CCHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC AGDSSKDDIIRAFERVGLSQYILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGD CCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHCCCCCCCEEECC TLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLSELLEKYHG HHCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATN CHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC AGDSSKDDIIRAFERVGLSQYILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGD CCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHCCCCCCCEEECC TLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLSELLEKYHG HHCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA