Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is yjjG [C]

Identifier: 218709597

GI number: 218709597

Start: 1724247

End: 1724753

Strand: Reverse

Name: yjjG [C]

Synonym: VS_1607

Alternate gene names: 218709597

Gene position: 1724753-1724247 (Counterclockwise)

Preceding gene: 218709598

Following gene: 218709596

Centisome position: 52.28

GC content: 45.56

Gene sequence:

>507_bases
ATGACAAAGCTAATCGAATTAACAAAAATAGTCTTATTCGACTGGGGCAATACGCTGATGGTCGATTTCCCAGACGCACA
AGGGAAGATGTGTGACTGGGAAACCGTACAAGAAGTGAGTGGTGCTCGCGCATTACTTGCTGATCTATCGAAAACTCAAC
AAGTTTATGTTGCCACCAACGCTGGTGATTCCAGTAAAGACGACATCATTCGAGCCTTTGAGCGTGTTGGCCTTTCTCAA
TATATATTGGGTTACTTTTGTAAGGCGAGCATTGGCTTTTCTAAGTTCGATTCGGGCTTTTATCCTGCCATCATTTCCAA
ACTCGGTGTAGCACCACAAGATATCACCATGGTGGGTGACACCTTAGACAAAGACATTTACCCAGCACTTGAAGCGGGTT
TGAAAGCGGTGTGGTTGAACACGGAGGGCGCTGATCTTAAGTCAGGGCATCCGAATGTCATGCAAGTTCAATCCCTAAGC
GAACTGTTGGAGAAGTACCATGGATGA

Upstream 100 bases:

>100_bases
CACGGTAAGATTGGCGATCAGTACTTTGACGAGATCCTTATCGAGAAGTTTTTATAGGCTCGCTTAAACACTAGATAATT
CATCGTATGCAGGAGGCAAG

Downstream 100 bases:

>100_bases
TCACTCTGAGATCTGGCGTCAGTATTACCAAAAGGCACTAAGCAAACCTCATTTAAAGAGAACTGAGTACGCAATTAAAC
TGAATGAGTCAGGCTTAAAT

Product: putative hydrolase

Products: NA

Alternate protein names: HAD Family Hydrolase; HAD Superfamily Hydrolase-Like

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATNAGDSSKDDIIRAFERVGLSQ
YILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGDTLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLS
ELLEKYHG

Sequences:

>Translated_168_residues
MTKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATNAGDSSKDDIIRAFERVGLSQ
YILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGDTLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLS
ELLEKYHG
>Mature_167_residues
TKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATNAGDSSKDDIIRAFERVGLSQY
ILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGDTLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLSE
LLEKYHG

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18447; Mature: 18316

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATN
CCHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
AGDSSKDDIIRAFERVGLSQYILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGD
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHCCCCCCCEEECC
TLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLSELLEKYHG
HHCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKLIELTKIVLFDWGNTLMVDFPDAQGKMCDWETVQEVSGARALLADLSKTQQVYVATN
CHHHHHHHHHEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
AGDSSKDDIIRAFERVGLSQYILGYFCKASIGFSKFDSGFYPAIISKLGVAPQDITMVGD
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHCCCCCCCEEECC
TLDKDIYPALEAGLKAVWLNTEGADLKSGHPNVMQVQSLSELLEKYHG
HHCHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA