Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709581

Identifier: 218709581

GI number: 218709581

Start: 1715052

End: 1715897

Strand: Reverse

Name: 218709581

Synonym: VS_1591

Alternate gene names: NA

Gene position: 1715897-1715052 (Counterclockwise)

Preceding gene: 218709582

Following gene: 218709580

Centisome position: 52.01

GC content: 42.43

Gene sequence:

>846_bases
ATGAAAATAACGACGCTGGTTGATAACTCTCGACTGGATAATAGGAAAGATTTAGCCGTTGAGCGCGGACTATCACTGCA
TATTGAAACTGAATCGCTAAAGATCTTGTTCGATATGGGAAGTGGCGATACGTTTTGTCAAAACGCACCATTACTGGGTA
TTGATATCAAAGATGTAGACCTCGCGGTCATATCACACAGGCATCATGATCATTGTAATGGCACCGCTGATTTTGTTGCT
CATAACTCTAAAGGCAAAGTGTTTCTCAAAAATTGCGAACAGAAAAACTACCATTTTCGGGCTTTCGGTTTTAAAAGTGA
TGTCGGGATCAATCCGGACTTACTAGAAAACAGCAACGAGCGGTTAGTCTTCGTTAATCGTACGACTGAGATCGCCCCAA
ATGTCTTTGCTATCACAGATATTAGCGTGAAACACGAACAACCTAAGGGTAATAAATACCTTTATACACAGTCTAAGAAT
CGACGGGAGCGCGACTCATTTGATCATGAATTACTGTTAGTGATTAAAGAGCCAGATGGTTTAGTTATATTCACGGGATG
TGCGCATAGTGGCGTTCTTAATATGGTTGATACAGCGGTTACTCTGTTCCCAGGAGAGAGAATAAAAGCGGTTGTCGGGG
GCTTCCATTTAGTGGGCTTACCATTGTTCAATAGTATTGGTGGCACAAAGCAAGACATTAGAGATCTTGGATTGACGTTG
TCTCAATACCCCATTGATAAACTGTATACAGGGCACTGTACAGGCAAGAAAGCTTATGGCCTGTTGAAAGAAGTATTAGG
CGAGCGTTTGGAAGCAATGCCGACAGGTCGGCGTATTCATGTGTAG

Upstream 100 bases:

>100_bases
TTTCTACAAAAGGTTGGGTGCAGAGGTTGAGCGAATGGATGGTCAAAGACCTTATTTCCGTTGGACAATGTCCGACTCGT
GATCACATAAAAAGAGAACT

Downstream 100 bases:

>100_bases
CGTTGGTCAAACCTTAGCTGTACGTTTGTCACTTGGTAAGAATTAAGGAGTTTTAAGTGAGTCATGAAGTAAGAGTAGGT
GTCGCTGCGGTTATTCTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVDLAVISHRHHDHCNGTADFVA
HNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNERLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKN
RRERDSFDHELLLVIKEPDGLVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL
SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV

Sequences:

>Translated_281_residues
MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVDLAVISHRHHDHCNGTADFVA
HNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNERLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKN
RRERDSFDHELLLVIKEPDGLVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL
SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV
>Mature_281_residues
MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVDLAVISHRHHDHCNGTADFVA
HNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNERLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKN
RRERDSFDHELLLVIKEPDGLVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL
SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV

Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor

COG id: COG1237

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 31352; Mature: 31352

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVD
CEEEEEECCCCCCCCHHHHHHCCCEEEEEECEEEEEEECCCCCCCCCCCCEEEEEECCCE
LAVISHRHHDHCNGTADFVAHNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNE
EEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCC
RLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKNRRERDSFDHELLLVIKEPDG
EEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCC
LVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL
EEEEECCCCCCHHHHHHHEEEECCCHHHHHHHCCEEEEEHHHHHHCCCCHHHHHHHCCCH
SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV
HCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure
MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVD
CEEEEEECCCCCCCCHHHHHHCCCEEEEEECEEEEEEECCCCCCCCCCCCEEEEEECCCE
LAVISHRHHDHCNGTADFVAHNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNE
EEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCC
RLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKNRRERDSFDHELLLVIKEPDG
EEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCC
LVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL
EEEEECCCCCCHHHHHHHEEEECCCHHHHHHHCCEEEEEHHHHHHCCCCHHHHHHHCCCH
SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV
HCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]