| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709581
Identifier: 218709581
GI number: 218709581
Start: 1715052
End: 1715897
Strand: Reverse
Name: 218709581
Synonym: VS_1591
Alternate gene names: NA
Gene position: 1715897-1715052 (Counterclockwise)
Preceding gene: 218709582
Following gene: 218709580
Centisome position: 52.01
GC content: 42.43
Gene sequence:
>846_bases ATGAAAATAACGACGCTGGTTGATAACTCTCGACTGGATAATAGGAAAGATTTAGCCGTTGAGCGCGGACTATCACTGCA TATTGAAACTGAATCGCTAAAGATCTTGTTCGATATGGGAAGTGGCGATACGTTTTGTCAAAACGCACCATTACTGGGTA TTGATATCAAAGATGTAGACCTCGCGGTCATATCACACAGGCATCATGATCATTGTAATGGCACCGCTGATTTTGTTGCT CATAACTCTAAAGGCAAAGTGTTTCTCAAAAATTGCGAACAGAAAAACTACCATTTTCGGGCTTTCGGTTTTAAAAGTGA TGTCGGGATCAATCCGGACTTACTAGAAAACAGCAACGAGCGGTTAGTCTTCGTTAATCGTACGACTGAGATCGCCCCAA ATGTCTTTGCTATCACAGATATTAGCGTGAAACACGAACAACCTAAGGGTAATAAATACCTTTATACACAGTCTAAGAAT CGACGGGAGCGCGACTCATTTGATCATGAATTACTGTTAGTGATTAAAGAGCCAGATGGTTTAGTTATATTCACGGGATG TGCGCATAGTGGCGTTCTTAATATGGTTGATACAGCGGTTACTCTGTTCCCAGGAGAGAGAATAAAAGCGGTTGTCGGGG GCTTCCATTTAGTGGGCTTACCATTGTTCAATAGTATTGGTGGCACAAAGCAAGACATTAGAGATCTTGGATTGACGTTG TCTCAATACCCCATTGATAAACTGTATACAGGGCACTGTACAGGCAAGAAAGCTTATGGCCTGTTGAAAGAAGTATTAGG CGAGCGTTTGGAAGCAATGCCGACAGGTCGGCGTATTCATGTGTAG
Upstream 100 bases:
>100_bases TTTCTACAAAAGGTTGGGTGCAGAGGTTGAGCGAATGGATGGTCAAAGACCTTATTTCCGTTGGACAATGTCCGACTCGT GATCACATAAAAAGAGAACT
Downstream 100 bases:
>100_bases CGTTGGTCAAACCTTAGCTGTACGTTTGTCACTTGGTAAGAATTAAGGAGTTTTAAGTGAGTCATGAAGTAAGAGTAGGT GTCGCTGCGGTTATTCTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVDLAVISHRHHDHCNGTADFVA HNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNERLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKN RRERDSFDHELLLVIKEPDGLVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV
Sequences:
>Translated_281_residues MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVDLAVISHRHHDHCNGTADFVA HNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNERLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKN RRERDSFDHELLLVIKEPDGLVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV >Mature_281_residues MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVDLAVISHRHHDHCNGTADFVA HNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNERLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKN RRERDSFDHELLLVIKEPDGLVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV
Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31352; Mature: 31352
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVD CEEEEEECCCCCCCCHHHHHHCCCEEEEEECEEEEEEECCCCCCCCCCCCEEEEEECCCE LAVISHRHHDHCNGTADFVAHNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNE EEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCC RLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKNRRERDSFDHELLLVIKEPDG EEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCC LVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL EEEEECCCCCCHHHHHHHEEEECCCHHHHHHHCCEEEEEHHHHHHCCCCHHHHHHHCCCH SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV HCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure MKITTLVDNSRLDNRKDLAVERGLSLHIETESLKILFDMGSGDTFCQNAPLLGIDIKDVD CEEEEEECCCCCCCCHHHHHHCCCEEEEEECEEEEEEECCCCCCCCCCCCEEEEEECCCE LAVISHRHHDHCNGTADFVAHNSKGKVFLKNCEQKNYHFRAFGFKSDVGINPDLLENSNE EEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCC RLVFVNRTTEIAPNVFAITDISVKHEQPKGNKYLYTQSKNRRERDSFDHELLLVIKEPDG EEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCC LVIFTGCAHSGVLNMVDTAVTLFPGERIKAVVGGFHLVGLPLFNSIGGTKQDIRDLGLTL EEEEECCCCCCHHHHHHHEEEECCCHHHHHHHCCEEEEEHHHHHHCCCCHHHHHHHCCCH SQYPIDKLYTGHCTGKKAYGLLKEVLGERLEAMPTGRRIHV HCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]