| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709580
Identifier: 218709580
GI number: 218709580
Start: 1714582
End: 1714995
Strand: Reverse
Name: 218709580
Synonym: VS_1590
Alternate gene names: NA
Gene position: 1714995-1714582 (Counterclockwise)
Preceding gene: 218709581
Following gene: 218709579
Centisome position: 51.98
GC content: 46.14
Gene sequence:
>414_bases GTGAGTCATGAAGTAAGAGTAGGTGTCGCTGCGGTTATTCTACGTGAAGGACGAGTACTACTTGGAGAGCGAATTGGTTC TCATGGGGCTCATACGTGGGCAACGCCGGGCGGACACCTTGAATGGGGTGAGAGCATTGAAGAGTGTGCCAAACGTGAAA CACTTGAAGAGACAGGCCTAGTTGTTAGTGGATTTGAAAAGCTCTCTTTTACCAATGATATTTTTGAGAAAGAGAACAAG CACTATATAACGCTGTTTGTTGTAGCTTCTGACGCTAGCGGCGAACCGCAGGTGACAGAACCTGATAAATGTAAGCAATG GAAATGGTTTAAGCTAGATGAGTTACCTGAGCCATTGTTTCTTCCTCTGACGAATCTGTTGAGCGATCCAGTCATCTTTG GGAAGCTGGCTTAG
Upstream 100 bases:
>100_bases AGCGTTTGGAAGCAATGCCGACAGGTCGGCGTATTCATGTGTAGCGTTGGTCAAACCTTAGCTGTACGTTTGTCACTTGG TAAGAATTAAGGAGTTTTAA
Downstream 100 bases:
>100_bases TAAAACAGATTCTCCTCATATCTTTAATTGAATGACTAAAGGATCAATGATGACATTACGAGTAGTTCCAGAGCTTTATT GTTTCGATATTAATGTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: MutT/Nudix Family Protein; ADP-Ribose Pyrophosphatase MutT; MutT Like Protein; MutT/NUDIX Family Protein; NUDIX Family Hydrolase; ADP-Ribose Pyrophosphatase; Hydrolase Protein MutT/Nudix Family; Mut Family Protein; NUDIX Family NudH Subfamily Hydrolase; MutT/Nudix Family Phosphohydrolase; MutT Protein; MutT/NUDIX Family Hydrolase
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSHEVRVGVAAVILREGRVLLGERIGSHGAHTWATPGGHLEWGESIEECAKRETLEETGLVVSGFEKLSFTNDIFEKENK HYITLFVVASDASGEPQVTEPDKCKQWKWFKLDELPEPLFLPLTNLLSDPVIFGKLA
Sequences:
>Translated_137_residues MSHEVRVGVAAVILREGRVLLGERIGSHGAHTWATPGGHLEWGESIEECAKRETLEETGLVVSGFEKLSFTNDIFEKENK HYITLFVVASDASGEPQVTEPDKCKQWKWFKLDELPEPLFLPLTNLLSDPVIFGKLA >Mature_136_residues SHEVRVGVAAVILREGRVLLGERIGSHGAHTWATPGGHLEWGESIEECAKRETLEETGLVVSGFEKLSFTNDIFEKENKH YITLFVVASDASGEPQVTEPDKCKQWKWFKLDELPEPLFLPLTNLLSDPVIFGKLA
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8922792, Length=101, Percent_Identity=46.5346534653465, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15302; Mature: 15170
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHEVRVGVAAVILREGRVLLGERIGSHGAHTWATPGGHLEWGESIEECAKRETLEETGL CCCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC VVSGFEKLSFTNDIFEKENKHYITLFVVASDASGEPQVTEPDKCKQWKWFKLDELPEPLF EEECHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCHH LPLTNLLSDPVIFGKLA HHHHHHHCCCEEEEECC >Mature Secondary Structure SHEVRVGVAAVILREGRVLLGERIGSHGAHTWATPGGHLEWGESIEECAKRETLEETGL CCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC VVSGFEKLSFTNDIFEKENKHYITLFVVASDASGEPQVTEPDKCKQWKWFKLDELPEPLF EEECHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCHH LPLTNLLSDPVIFGKLA HHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA