| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709549
Identifier: 218709549
GI number: 218709549
Start: 1690398
End: 1691144
Strand: Reverse
Name: 218709549
Synonym: VS_1558
Alternate gene names: NA
Gene position: 1691144-1690398 (Counterclockwise)
Preceding gene: 218709550
Following gene: 218709548
Centisome position: 51.26
GC content: 40.16
Gene sequence:
>747_bases TTGAAAACTGGAGTAACTATAAGCCTAGCTCAAGTCCCTGTCACTAGAGGTGAGGTGTGTGCAAACCTTGAACGTCACCT CAAAATGATTGAGCAATCATATTATTATGATGCAGATGTAGTTGTTTTCCCTGAATTATCATTGACTGGCTATGAGTTGG ACTTAGCTGCTGAGCTAGCTTTTTCTCCAAGTCCATCGAACTTCAAAGAATTATCTCAAGCTTCGGTCGAAAATGAGATT ATCACTATAGCTGGGTGCCCATTAAAAGTTAACAATGACTCAAAGCCAACAATAGGTGCTGTCATTTGCTTTCCTGATGG CACTGTCCAATTTTACTCGAAACAACATTTGCATGAAGGAGAAGGGACGTATTGCTCATTCGGTTTGTCAGACTACTTTT TTAAAGTAAATGGACATCAAATAGCGCTGGCTATTTGCGCGGACTTTACGGAATTGGAACATTCTCGACGGGCTAAAAAA TTGGGCTCAGATATCTATGTTGTCAGTGCTCTTATTTCTAAAAATGGATTTGAACCTGACTCTAAGATTTTATCGGAAAT CGCATCAGAGCAAGGTTTCCCTGTACTCTTAAGTAACCATATTTCAGTGACAGGCGGTTGGGAAACTTGCGGCAAGAGTT CAGTTTGGAATTCACACGGAGAGCTCGTAAATAACTCTAGTTCCAAAGAATATGGTTTGGTCTTGTGCAATATTATGGGC AATGAGGTCGAGGTAAATCAAACATAA
Upstream 100 bases:
>100_bases AGCAAACTCCATAGATAGAAGCGGCCAAGTCCAACAGGTATTTATCCATTGTGCTACGACAACGGATAAATACTTAAGCG TTATGTTTTAAGGAGAAAAC
Downstream 100 bases:
>100_bases CAAGCGCTTCAAGCTGATTCGCAACGCATGCCATTTTTGGTTCAAATTGGTTTAGTGTTTACGGTGCAATGCACTAAGTT CGATTTCGTTGCTCACAGCT
Product: putative amidohydrolase
Products: NA
Alternate protein names: Hydrolase; Carbon-Nitrogen Hydrolase; Carbon-Nitrogen Family Hydrolase; Carbon-Nitrogen Hydrolase Family Protein; Carbon-Nitrogen Hydrolase Protein; Hydrolase Carbon-Nitrogen Family
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELAFSPSPSNFKELSQASVENEI ITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEGEGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKK LGSDIYVVSALISKNGFEPDSKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG NEVEVNQT
Sequences:
>Translated_248_residues MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELAFSPSPSNFKELSQASVENEI ITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEGEGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKK LGSDIYVVSALISKNGFEPDSKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG NEVEVNQT >Mature_248_residues MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELAFSPSPSNFKELSQASVENEI ITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEGEGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKK LGSDIYVVSALISKNGFEPDSKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG NEVEVNQT
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27072; Mature: 27072
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELA CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCEEEEEEEEEE FSPSPSNFKELSQASVENEIITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEG ECCCCCHHHHHHHHHHCCCEEEEECCEEEECCCCCCCEEEEEECCCCCEEEHHHHHCCCC EGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKKLGSDIYVVSALISKNGFEPD CCCEEEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCH SKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG HHHHHHHHHCCCCEEEEECCEEEECCHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEECC NEVEVNQT CEEEECCC >Mature Secondary Structure MKTGVTISLAQVPVTRGEVCANLERHLKMIEQSYYYDADVVVFPELSLTGYELDLAAELA CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCEEEEEEEEEE FSPSPSNFKELSQASVENEIITIAGCPLKVNNDSKPTIGAVICFPDGTVQFYSKQHLHEG ECCCCCHHHHHHHHHHCCCEEEEECCEEEECCCCCCCEEEEEECCCCCEEEHHHHHCCCC EGTYCSFGLSDYFFKVNGHQIALAICADFTELEHSRRAKKLGSDIYVVSALISKNGFEPD CCCEEEECCCEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCH SKILSEIASEQGFPVLLSNHISVTGGWETCGKSSVWNSHGELVNNSSSKEYGLVLCNIMG HHHHHHHHHCCCCEEEEECCEEEECCHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEECC NEVEVNQT CEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA