| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yniA [C]
Identifier: 218709504
GI number: 218709504
Start: 1648497
End: 1649363
Strand: Direct
Name: yniA [C]
Synonym: VS_1513
Alternate gene names: 218709504
Gene position: 1648497-1649363 (Clockwise)
Preceding gene: 218709502
Following gene: 218709505
Centisome position: 49.97
GC content: 41.87
Gene sequence:
>867_bases ATGTGGCAGGCCATTTCTCAACAACTTTCAGATACTCTTCTATTTAACTTCCAGATAACTGAACGTACCAAGGTTTCTGG TGGCGACATTAACGATTGCTATATGATTAGCGATGGTAACGAACGTTACTTTGTAAAAGTGAACCAGCGAGAATTTTTAC CTAAGTTTGAAATTGAAGCTGAGAACTTACGCTTGTTAAGAGAGACTTCTACCGTTTATGTTCCTGAGTTGGTACTGATT GGTAAAACCAAAGAATGCTCGTTCATTATCCTTAATTACTTGCCGACCAAGCCGCTTGAAACAAGCAATAATAGCTATGA CTTTGGCGTTCAACTTGCCCAATTGCATCAATGGGGTGAACAGAAAGAGTTTGGTTGTGACCAAGACAATTATATTGGTA GCACCCTTCAACCCAACCCTTGGCATAAGAAATGGGGACGTTTTTTCTCTGAGCAACGCATTGGCTTCCAACTGCAATTG TTAAAAGAAAAAGGCATCGAATTCGGCGATATCGATGATATTGTTGATGTCGTGAATATGCGTCTTGCAGGCCACAACCC TCGCCCTTCTTTGCTTCATGGCGACCTTTGGAACGGTAATGTTGCTAACTCAGCCTTTGGGCCAATCTGTTACGATCCCG CTTGTTATTGGGGCGATCATGAATGTGATTTAGCGCTAACTGAACTGTTTGAAGGGTTTTCAAAAGAGTTTTATGAAGGT TACCAGAGCGTCAATCCACTCGACGTTGGCTATACTGATCGGAAAGACATTTATAATTTGTACCATCTTCTCAACCACTG CAATCAATTTGGCGGCGAGTATTTAGCACAAACTGAGGCGTGTATTCAGAAGATACAGGCCGTTTAA
Upstream 100 bases:
>100_bases CAAGAACATGACGAGTGCGTCTATAAATTGCTCAGATTTATCCTAAACTATTGCTATTAAACAAACAGTATTTCTAACCT TCAGTCTTTGAGGATTTCCT
Downstream 100 bases:
>100_bases CACCAATCACAGCTAGCTACTGCGATCGATATAAGTGCAACGTTCGATATCGCTATTTGTTACGCCCCATACAAGCTACT ACGATTAGTGCAAGTTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MWQAISQQLSDTLLFNFQITERTKVSGGDINDCYMISDGNERYFVKVNQREFLPKFEIEAENLRLLRETSTVYVPELVLI GKTKECSFIILNYLPTKPLETSNNSYDFGVQLAQLHQWGEQKEFGCDQDNYIGSTLQPNPWHKKWGRFFSEQRIGFQLQL LKEKGIEFGDIDDIVDVVNMRLAGHNPRPSLLHGDLWNGNVANSAFGPICYDPACYWGDHECDLALTELFEGFSKEFYEG YQSVNPLDVGYTDRKDIYNLYHLLNHCNQFGGEYLAQTEACIQKIQAV
Sequences:
>Translated_288_residues MWQAISQQLSDTLLFNFQITERTKVSGGDINDCYMISDGNERYFVKVNQREFLPKFEIEAENLRLLRETSTVYVPELVLI GKTKECSFIILNYLPTKPLETSNNSYDFGVQLAQLHQWGEQKEFGCDQDNYIGSTLQPNPWHKKWGRFFSEQRIGFQLQL LKEKGIEFGDIDDIVDVVNMRLAGHNPRPSLLHGDLWNGNVANSAFGPICYDPACYWGDHECDLALTELFEGFSKEFYEG YQSVNPLDVGYTDRKDIYNLYHLLNHCNQFGGEYLAQTEACIQKIQAV >Mature_288_residues MWQAISQQLSDTLLFNFQITERTKVSGGDINDCYMISDGNERYFVKVNQREFLPKFEIEAENLRLLRETSTVYVPELVLI GKTKECSFIILNYLPTKPLETSNNSYDFGVQLAQLHQWGEQKEFGCDQDNYIGSTLQPNPWHKKWGRFFSEQRIGFQLQL LKEKGIEFGDIDDIVDVVNMRLAGHNPRPSLLHGDLWNGNVANSAFGPICYDPACYWGDHECDLALTELFEGFSKEFYEG YQSVNPLDVGYTDRKDIYNLYHLLNHCNQFGGEYLAQTEACIQKIQAV
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family [H]
Homologues:
Organism=Homo sapiens, GI20149680, Length=291, Percent_Identity=30.5841924398625, Blast_Score=124, Evalue=9e-29, Organism=Homo sapiens, GI11545906, Length=272, Percent_Identity=31.6176470588235, Blast_Score=121, Evalue=6e-28, Organism=Escherichia coli, GI1788019, Length=288, Percent_Identity=45.1388888888889, Blast_Score=280, Evalue=6e-77, Organism=Caenorhabditis elegans, GI212659227, Length=267, Percent_Identity=26.2172284644195, Blast_Score=86, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016477 - InterPro: IPR011009 [H]
Pfam domain/function: PF03881 Fructosamin_kin [H]
EC number: NA
Molecular weight: Translated: 33216; Mature: 33216
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQAISQQLSDTLLFNFQITERTKVSGGDINDCYMISDGNERYFVKVNQREFLPKFEIEA CCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECHHHCCCCEEECH ENLRLLRETSTVYVPELVLIGKTKECSFIILNYLPTKPLETSNNSYDFGVQLAQLHQWGE HHHHHHHHCCEEEECEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC QKEFGCDQDNYIGSTLQPNPWHKKWGRFFSEQRIGFQLQLLKEKGIEFGDIDDIVDVVNM CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHCCCCCCCHHHHHHHHHH RLAGHNPRPSLLHGDLWNGNVANSAFGPICYDPACYWGDHECDLALTELFEGFSKEFYEG HHCCCCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH YQSVNPLDVGYTDRKDIYNLYHLLNHCNQFGGEYLAQTEACIQKIQAV HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWQAISQQLSDTLLFNFQITERTKVSGGDINDCYMISDGNERYFVKVNQREFLPKFEIEA CCHHHHHHHHHEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECHHHCCCCEEECH ENLRLLRETSTVYVPELVLIGKTKECSFIILNYLPTKPLETSNNSYDFGVQLAQLHQWGE HHHHHHHHCCEEEECEEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC QKEFGCDQDNYIGSTLQPNPWHKKWGRFFSEQRIGFQLQLLKEKGIEFGDIDDIVDVVNM CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHCCCCCCCHHHHHHHHHH RLAGHNPRPSLLHGDLWNGNVANSAFGPICYDPACYWGDHECDLALTELFEGFSKEFYEG HHCCCCCCCCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH YQSVNPLDVGYTDRKDIYNLYHLLNHCNQFGGEYLAQTEACIQKIQAV HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA