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The map label for this gene is spr [H]

Identifier: 218709502

GI number: 218709502

Start: 1647122

End: 1647607

Strand: Direct

Name: spr [H]

Synonym: VS_1511

Alternate gene names: 218709502

Gene position: 1647122-1647607 (Clockwise)

Preceding gene: 218709500

Following gene: 218709504

Centisome position: 49.92

GC content: 41.77

Gene sequence:

>486_bases
ATGAAATTCAGAAAAATGGCTGTAGTTACAATAACTTTAGCAATATTGGCTGCTTGTAGCTCGACGCCATCTCCTTCTCA
GCTTAGTCAAACAGCACACAAGCCACTGTCAAAGTTAGAGCAATCAACGACCAATGCGTATATGAGTGTGTATGAACAGT
GGAAAGGTGTGCCATATCATTTCGGTGGGACTTCATTTAGAGGCGTAGATTGCTCTGCTTTCGTTCAAATCGCAGTGCAA
ACTGCGACCCAGCAAGCCTTACCGAGAACCACAAAAGATCAAGTTAAAAAGGGAAAGGAAATAGCATATGGACAGGCAAT
AAGTGGTGACTTGGTGTTTTTCAAAACATCGATGACGGTACGACACGTCGGTGTATATTTAGGAAACAATCAATTCCTAC
ATGCTTCGACATCGAAAGGTGTCATTATATCGAGATTGGATAACCCTTATTGGGCCTCTAAGTTTTGGCATTTTAGGCGT
TTATAG

Upstream 100 bases:

>100_bases
AATCCAGTTTGACTACGAAAAAAGATATCCTTAAGTTAGTTCGTATACTAGAAGTCCTTGATGACGTTTATATTTCAGTT
TTTTGTCAGAAGAGTTACAT

Downstream 100 bases:

>100_bases
TGATTAAAAGATTAACTGATAACACAGTTGCTTTGAAGGTACTATTTAAACGCCTATCGCTGTTTAGCCTAGTAAATGTA
CTAGAAGCTAATTAGTCGTA

Product: putative lipoprotein NlpC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKFRKMAVVTITLAILAACSSTPSPSQLSQTAHKPLSKLEQSTTNAYMSVYEQWKGVPYHFGGTSFRGVDCSAFVQIAVQ
TATQQALPRTTKDQVKKGKEIAYGQAISGDLVFFKTSMTVRHVGVYLGNNQFLHASTSKGVIISRLDNPYWASKFWHFRR
L

Sequences:

>Translated_161_residues
MKFRKMAVVTITLAILAACSSTPSPSQLSQTAHKPLSKLEQSTTNAYMSVYEQWKGVPYHFGGTSFRGVDCSAFVQIAVQ
TATQQALPRTTKDQVKKGKEIAYGQAISGDLVFFKTSMTVRHVGVYLGNNQFLHASTSKGVIISRLDNPYWASKFWHFRR
L
>Mature_161_residues
MKFRKMAVVTITLAILAACSSTPSPSQLSQTAHKPLSKLEQSTTNAYMSVYEQWKGVPYHFGGTSFRGVDCSAFVQIAVQ
TATQQALPRTTKDQVKKGKEIAYGQAISGDLVFFKTSMTVRHVGVYLGNNQFLHASTSKGVIISRLDNPYWASKFWHFRR
L

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=144, Percent_Identity=42.3611111111111, Blast_Score=124, Evalue=3e-30,
Organism=Escherichia coli, GI1788001, Length=134, Percent_Identity=45.5223880597015, Blast_Score=117, Evalue=4e-28,
Organism=Escherichia coli, GI1787944, Length=127, Percent_Identity=34.6456692913386, Blast_Score=71, Evalue=3e-14,
Organism=Escherichia coli, GI1786421, Length=140, Percent_Identity=32.8571428571429, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 17925; Mature: 17925

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRKMAVVTITLAILAACSSTPSPSQLSQTAHKPLSKLEQSTTNAYMSVYEQWKGVPYH
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FGGTSFRGVDCSAFVQIAVQTATQQALPRTTKDQVKKGKEIAYGQAISGDLVFFKTSMTV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEECCCCCCCCEEEEEECCEE
RHVGVYLGNNQFLHASTSKGVIISRLDNPYWASKFWHFRRL
EEEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKFRKMAVVTITLAILAACSSTPSPSQLSQTAHKPLSKLEQSTTNAYMSVYEQWKGVPYH
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FGGTSFRGVDCSAFVQIAVQTATQQALPRTTKDQVKKGKEIAYGQAISGDLVFFKTSMTV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEECCCCCCCCEEEEEECCEE
RHVGVYLGNNQFLHASTSKGVIISRLDNPYWASKFWHFRRL
EEEEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]