| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is 218709503
Identifier: 218709503
GI number: 218709503
Start: 1647699
End: 1648043
Strand: Reverse
Name: 218709503
Synonym: VS_1512
Alternate gene names: NA
Gene position: 1648043-1647699 (Counterclockwise)
Preceding gene: 218709507
Following gene: 218709501
Centisome position: 49.95
GC content: 38.26
Gene sequence:
>345_bases GTGGTTGTAGAAACCGATGGCTATTTGGCTTTGATCGAACACTTATCATTTAACCTAGATGTCTTTACTAATAGTAATGG CGATACAGGTAATGAAAGTGTCGAAGACATCATCACTGACATGATATCAACAAACATCATGGCTATTTTCGAGCAAAACC CTGAGTTACATTCAAGCGTTCGTTTTCAACTATTGAAAGAAGCGGATTCAGTGGTGGCTGATTTAGGTGAAGTGTTAGCT GGTGTATGGTCAAAAAAAGCGACTAACGAACAAATTGTATTCTTAGATGAATACATCGCATTAGTGAAGAATCTGTTTGA TACTGCGGTCGCTCAATACGACTAA
Upstream 100 bases:
>100_bases AATACAGTTTTTAGTAATAAAGAGATGACAAACAGACTCATATACATAGTATTAGGTAGGTACATATTAATCTGCTCTTG AGCTTAAACGGAGATTTATT
Downstream 100 bases:
>100_bases TTAGCTTCTAGTACATTTACTAGGCTAAACAGCGATAGGCGTTTAAATAGTACCTTCAAAGCAACTGTGTTATCAGTTAA TCTTTTAATCACTATAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MVVETDGYLALIEHLSFNLDVFTNSNGDTGNESVEDIITDMISTNIMAIFEQNPELHSSVRFQLLKEADSVVADLGEVLA GVWSKKATNEQIVFLDEYIALVKNLFDTAVAQYD
Sequences:
>Translated_114_residues MVVETDGYLALIEHLSFNLDVFTNSNGDTGNESVEDIITDMISTNIMAIFEQNPELHSSVRFQLLKEADSVVADLGEVLA GVWSKKATNEQIVFLDEYIALVKNLFDTAVAQYD >Mature_114_residues MVVETDGYLALIEHLSFNLDVFTNSNGDTGNESVEDIITDMISTNIMAIFEQNPELHSSVRFQLLKEADSVVADLGEVLA GVWSKKATNEQIVFLDEYIALVKNLFDTAVAQYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12660; Mature: 12660
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVETDGYLALIEHLSFNLDVFTNSNGDTGNESVEDIITDMISTNIMAIFEQNPELHSSV CEECCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHH RFQLLKEADSVVADLGEVLAGVWSKKATNEQIVFLDEYIALVKNLFDTAVAQYD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVVETDGYLALIEHLSFNLDVFTNSNGDTGNESVEDIITDMISTNIMAIFEQNPELHSSV CEECCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHH RFQLLKEADSVVADLGEVLAGVWSKKATNEQIVFLDEYIALVKNLFDTAVAQYD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA