| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709439
Identifier: 218709439
GI number: 218709439
Start: 1583415
End: 1583597
Strand: Reverse
Name: 218709439
Synonym: VS_1448
Alternate gene names: NA
Gene position: 1583597-1583415 (Counterclockwise)
Preceding gene: 218709440
Following gene: 218709438
Centisome position: 48.0
GC content: 44.26
Gene sequence:
>183_bases GTGTTTACTGCAATCTCATGGAAGATAGATTGTAAGCTTCATGCGTATTACAGGATTTATGTTACGGGCTTCGTTCTAAA AGCGATTCTCGCTCTTCGCATGTACGAAACAAGTTCCGACAATGAGCAGTTCTCTCGCCCACCCTTTGAAGCCCTCAGGC TTTCAGCAAACCACTCAACATAA
Upstream 100 bases:
>100_bases GTTAATGAATATGGGAGTTCCAGCTCCCATATTTTTTATGGTCTTTAACAGTCCATATCATTAAGACTGATATTAGTAAA AATACCGGCATACTGTCAAT
Downstream 100 bases:
>100_bases ATCTAACCACATAATACGCACCTAAGGTGTTAGAGCAATTTAGTAATGTCCGGTTTGAGCCATTTTAAAATGTCCTCCTA AGCTTACCTATATTGGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MFTAISWKIDCKLHAYYRIYVTGFVLKAILALRMYETSSDNEQFSRPPFEALRLSANHST
Sequences:
>Translated_60_residues MFTAISWKIDCKLHAYYRIYVTGFVLKAILALRMYETSSDNEQFSRPPFEALRLSANHST >Mature_60_residues MFTAISWKIDCKLHAYYRIYVTGFVLKAILALRMYETSSDNEQFSRPPFEALRLSANHST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7003; Mature: 7003
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTAISWKIDCKLHAYYRIYVTGFVLKAILALRMYETSSDNEQFSRPPFEALRLSANHST CCCEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCC >Mature Secondary Structure MFTAISWKIDCKLHAYYRIYVTGFVLKAILALRMYETSSDNEQFSRPPFEALRLSANHST CCCEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA