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The map label for this gene is 218709438

Identifier: 218709438

GI number: 218709438

Start: 1582810

End: 1583322

Strand: Reverse

Name: 218709438

Synonym: VS_1447

Alternate gene names: NA

Gene position: 1583322-1582810 (Counterclockwise)

Preceding gene: 218709439

Following gene: 218709437

Centisome position: 47.99

GC content: 46.0

Gene sequence:

>513_bases
TTGGTCTGCTTAGGAGTTATCCGGATGCTTATTACTATGAGTGAAAAAGATATTCAGCGATTCAAGGTGCTTACTGACGT
ACGTGAAAAACGACTACGCCAAGTTGACGCTGCTATCATTTTGAATCTGTCTGCGCGTCATATCCGACGTTTGGTAAACA
AACTTGTCTCTCTTGGCGCTCAAAGTCTTACACACGCAGCGCGTGGACGCCCAAGTAATCGACGCTACTCAGAACATTTC
AGAATTGAAATACTGAAACTTATCCGTGAGCATTACTCTGACTTCTCACCAACGTTCGCTCTGGAAAAACTGACTGAACT
GCACAATCTATCAGTCTCTAAAGAAACACTCCGTCAATGGATGATCGCCGACGGACTGTGGCTTCCACATGCGCAACGAA
AACCTCGGATCTATCAGCCTCGTTACCGTCGTGATTGCTTGGGTGAACTTATTCAAATTGACGGCTCCCATCATGACTGG
TTTGAAGGCCGCAGCGACAAATGCTGCCTATAA

Upstream 100 bases:

>100_bases
CAACATAAATCTAACCACATAATACGCACCTAAGGTGTTAGAGCAATTTAGTAATGTCCGGTTTGAGCCATTTTAAAATG
TCCTCCTAAGCTTACCTATA

Downstream 100 bases:

>100_bases
TTGCTCAGTTTTGCGTATTGGCGCGACGAACATCGTCAGCTCGTCGAACGTCACGGTCGAATTGATTCCCCAAAGTTTTA
CCCACCTAAAGAACATCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MVCLGVIRMLITMSEKDIQRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGAQSLTHAARGRPSNRRYSEHF
RIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQWMIADGLWLPHAQRKPRIYQPRYRRDCLGELIQIDGSHHDW
FEGRSDKCCL

Sequences:

>Translated_170_residues
MVCLGVIRMLITMSEKDIQRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGAQSLTHAARGRPSNRRYSEHF
RIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQWMIADGLWLPHAQRKPRIYQPRYRRDCLGELIQIDGSHHDW
FEGRSDKCCL
>Mature_170_residues
MVCLGVIRMLITMSEKDIQRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGAQSLTHAARGRPSNRRYSEHF
RIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQWMIADGLWLPHAQRKPRIYQPRYRRDCLGELIQIDGSHHDW
FEGRSDKCCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 20044; Mature: 20044

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCLGVIRMLITMSEKDIQRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGA
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QSLTHAARGRPSNRRYSEHFRIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQW
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
MIADGLWLPHAQRKPRIYQPRYRRDCLGELIQIDGSHHDWFEGRSDKCCL
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVCLGVIRMLITMSEKDIQRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGA
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QSLTHAARGRPSNRRYSEHFRIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQW
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
MIADGLWLPHAQRKPRIYQPRYRRDCLGELIQIDGSHHDWFEGRSDKCCL
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]