Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709426

Identifier: 218709426

GI number: 218709426

Start: 1576233

End: 1576832

Strand: Reverse

Name: 218709426

Synonym: VS_1435

Alternate gene names: NA

Gene position: 1576832-1576233 (Counterclockwise)

Preceding gene: 218709435

Following gene: 218709425

Centisome position: 47.79

GC content: 41.33

Gene sequence:

>600_bases
ATGAAAATCGGTATGGTTGCCCTATCACTATTCACCGCTTTTGGCATGAGTTCATACGCGATCGCTAATGAAAATGACAC
AGCAGCTAAAGAGCTTGGTCATTTTTATGCAGGTGTAGATGTCGGATTTTACAATGAAACGGAATTAGAATACCGCGGTA
GCAAAATTGAAGATTCTTCTGATCTAGCTGACTTGAGTTATAACTTAGTTGGCGGTTATGAGTTCAATACACACGATGTA
GTAAAGCTGGGATTAGAAGCGGAGTACCGAAAAATTGGCAAAGTTAACTTTGCTCAAATGATGGATATGGAAGGCCAAGC
CTTCTTCGTGAATGTTAAACCCAAATTCATCGTTAAAGGCGACATCTTGGATTTGTATGTCTCCCTGTTAGCAGGCGTTG
GATCTATTGATACGGAAATCAAAGCCTTTGGGCTCTCAGCTTCTGAATCTGAGGCCGCTTACCAAATCGGTGGAGAATTT
GGCGCAATAATTACCGATAACATCGACGTTCATATCGGTTACCGCTCTGCACATATTGAAATAGAGTCCATCGATGTTTC
ATCCAAAACAGCATACATTGGTGCACGATACCATTTCTAA

Upstream 100 bases:

>100_bases
CATAAAATCAGATGGTTACACAAAACCATTATTAGTTTAAAAGCTCTACATTTGGTAAGGTATTCAAGGAATCAATAACT
TATTATATAAAAGGCTTAAT

Downstream 100 bases:

>100_bases
AGTTCCTTCAATGGCTAGACCAATTTATTGCGGTCAACTAGCCTAACATGGCAAATAGTCCGATCTCTTTGAGGTCGGAT
TTATCATTATTGGTTCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSSDLADLSYNLVGGYEFNTHDV
VKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKGDILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEF
GAIITDNIDVHIGYRSAHIEIESIDVSSKTAYIGARYHF

Sequences:

>Translated_199_residues
MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSSDLADLSYNLVGGYEFNTHDV
VKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKGDILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEF
GAIITDNIDVHIGYRSAHIEIESIDVSSKTAYIGARYHF
>Mature_199_residues
MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSSDLADLSYNLVGGYEFNTHDV
VKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKGDILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEF
GAIITDNIDVHIGYRSAHIEIESIDVSSKTAYIGARYHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21766; Mature: 21766

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSS
CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCC
DLADLSYNLVGGYEFNTHDVVKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKG
CHHHEEEEEEECEEECCCCEEEECCCHHHHHHCCCCHHHHHCCCCCEEEEECCCEEEEEC
DILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEFGAIITDNIDVHIGYRSAHIE
CHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEECCEEEEEEEEEEEEE
IESIDVSSKTAYIGARYHF
EEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MKIGMVALSLFTAFGMSSYAIANENDTAAKELGHFYAGVDVGFYNETELEYRGSKIEDSS
CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCC
DLADLSYNLVGGYEFNTHDVVKLGLEAEYRKIGKVNFAQMMDMEGQAFFVNVKPKFIVKG
CHHHEEEEEEECEEECCCCEEEECCCHHHHHHCCCCHHHHHCCCCCEEEEECCCEEEEEC
DILDLYVSLLAGVGSIDTEIKAFGLSASESEAAYQIGGEFGAIITDNIDVHIGYRSAHIE
CHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEECCEEEEEEEEEEEEE
IESIDVSSKTAYIGARYHF
EEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA