| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709435
Identifier: 218709435
GI number: 218709435
Start: 1581900
End: 1582202
Strand: Reverse
Name: 218709435
Synonym: VS_1444
Alternate gene names: NA
Gene position: 1582202-1581900 (Counterclockwise)
Preceding gene: 218709436
Following gene: 218709426
Centisome position: 47.96
GC content: 41.58
Gene sequence:
>303_bases ATGACGCCTTTTCAGCTCACGAACAAGGCTAAGTCCGATCTAAAAGACATAGCCTTATTTACTGAGCGTCGCTGGGGCCG CAAGCAACGAAATGTCTATATCAGACAATTCGATGCCACATTTGGGCGCTTAGCGGAAAATCCAGAGCTAGGAAAAACTT GCGATGAAATCAGACCAGATTATCGAAAATTCCCGCTTGCCAGTCATGTCATTTTCTACCAGAAAACGAATAACCAACCT ACTCTAATCATCCGAATTTTACATAAAAGTATGGATGTTAGCTCAATCTTTGACATGTCATAA
Upstream 100 bases:
>100_bases TGGATACGTTACGACAGTTGCTCGTGGAAGGTGAAAACAGTGGAATCGCGGATTACGACCTCGATGCTTTCTTTAACGAA CTCGACAGTGAAGAGAAGAA
Downstream 100 bases:
>100_bases ACTACTGAAATACAAATGAAAACCTTATTGAGACTGAGGTTGATTATGTTTATATTCTCTTGCCAGAGTAACTAAATCAA AATCCGAATATCTTTCTTTA
Product: putative addiction module toxin
Products: NA
Alternate protein names: Plasmid Stabilization Element ParE; Plasmid Stabilization System Protein RelE/ParE Family; Plasmid Stabilization System Protein; Addiction Module xin
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MTPFQLTNKAKSDLKDIALFTERRWGRKQRNVYIRQFDATFGRLAENPELGKTCDEIRPDYRKFPLASHVIFYQKTNNQP TLIIRILHKSMDVSSIFDMS
Sequences:
>Translated_100_residues MTPFQLTNKAKSDLKDIALFTERRWGRKQRNVYIRQFDATFGRLAENPELGKTCDEIRPDYRKFPLASHVIFYQKTNNQP TLIIRILHKSMDVSSIFDMS >Mature_99_residues TPFQLTNKAKSDLKDIALFTERRWGRKQRNVYIRQFDATFGRLAENPELGKTCDEIRPDYRKFPLASHVIFYQKTNNQPT LIIRILHKSMDVSSIFDMS
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11810; Mature: 11679
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFQLTNKAKSDLKDIALFTERRWGRKQRNVYIRQFDATFGRLAENPELGKTCDEIRPD CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHCCCCCCCCCHHHCCCC YRKFPLASHVIFYQKTNNQPTLIIRILHKSMDVSSIFDMS HHHCCCCCEEEEEEECCCCCEEEEEEHHHHCCHHHHCCCC >Mature Secondary Structure TPFQLTNKAKSDLKDIALFTERRWGRKQRNVYIRQFDATFGRLAENPELGKTCDEIRPD CCCCCCHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHCCCCCCCCCHHHCCCC YRKFPLASHVIFYQKTNNQPTLIIRILHKSMDVSSIFDMS HHHCCCCCEEEEEEECCCCCEEEEEEHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA