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The map label for this gene is aapJ [H]

Identifier: 218709394

GI number: 218709394

Start: 1533486

End: 1534514

Strand: Reverse

Name: aapJ [H]

Synonym: VS_1403

Alternate gene names: 218709394

Gene position: 1534514-1533486 (Counterclockwise)

Preceding gene: 218709396

Following gene: 218709393

Centisome position: 46.51

GC content: 44.41

Gene sequence:

>1029_bases
ATGACAAATAAACTAACACTTCTTGCTTCAGTAGTAGCTGCATCAACTGCGATGATGGCAACATCAGCATCAGCGGCAGA
AAGCACTCTGGACAAAGTCACATCTCAAGGTTTTCTAACTTGTGGTGTAAGTACAGGTCTTCCAGGGTTCTCTAACCCTA
ACTCAAAAGGTGAATGGGAAGGAATTGATGTTGAGTATTGTCAAGCTCTTGCAGCGGCTGTACTCGGTGACAAGACTAAA
GTTAAGTATGTACCGCTAACAGCAAAAGAGCGTTTTACCGCGCTTCAATCTGGTGAAATAGACGTACTATCTCGTAATAC
AACATGGACGCTACATCGTGACACTGCTCTAGGTTTGAACTTCGTAGGCGTTAACTACTACGATGGTCAAGGCTTCATGG
TTAAGAAAGAACTTGGACTAACAAGTGCTCAAGAACTAGATGGCGCTTCAGTGTGTGTTCAATCAGGTACAACGACTGAA
CTTAACCTAGCCGATTACTTCCGTAACAGTGGCATGTCTTACAAGCCAGTGGTATTTGATACGGCAGCACAAACATCAAA
AGGTTTCGACGCGGGTCGTTGTGATGTTCTTACAACTGACCAATCTGGTCTATATGCTCTTCGCCTAAATCTAGCTGATC
CTAAATCTGCACAGGTACTTCCTGAAATCATATCTAAAGAGCCACTAGGCCCTGTTGTTCGTCAAGATGATGACAAGTGG
TTCAACGTTGCTAAATGGACCCTTTCTGCAATGATTAACGCAGAAGAGTACGGCATCTCTTCTAAGAATGCTGACGAAAT
GCTTAAGTCAAAAGATCCAAACATCAAGCGTATTCTTGGTGTTGACGGTCCTAAAGGTAAAGGCCTTGGCATTCGTGACG
ATTGGGGTTACCAAGTCATTAAACAAGTTGGTAACTACGGTGAGAGCTTCGAACGTACTGTGGGTACAGGTTCACCACTA
CAGATCTCTCGTGGCGTAAACGCACTATGGAATGCGGGCGGCTTTATGTACGCTCCACCAATCCGTTAA

Upstream 100 bases:

>100_bases
GCTTAATTTGAGCAACAAGGTCATAGACAACGCAACACACAAGAGACACTCAAACGAGTATGAGTATCAGGTGTCACCTG
GTTAACAAGGAAGGATACAA

Downstream 100 bases:

>100_bases
TAAATTTACAAGCATCAATTAGGGCGGACTTTTCCGCCCTATTTATTAAATGGATTTGAGGTTATAGCAGTATGAAACCT
AATGAAACTATTTCTCCAAC

Product: amino acid ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTNKLTLLASVVAASTAMMATSASAAESTLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTK
VKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKELGLTSAQELDGASVCVQSGTTTE
LNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLADPKSAQVLPEIISKEPLGPVVRQDDDKW
FNVAKWTLSAMINAEEYGISSKNADEMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPL
QISRGVNALWNAGGFMYAPPIR

Sequences:

>Translated_342_residues
MTNKLTLLASVVAASTAMMATSASAAESTLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTK
VKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKELGLTSAQELDGASVCVQSGTTTE
LNLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLADPKSAQVLPEIISKEPLGPVVRQDDDKW
FNVAKWTLSAMINAEEYGISSKNADEMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPL
QISRGVNALWNAGGFMYAPPIR
>Mature_341_residues
TNKLTLLASVVAASTAMMATSASAAESTLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWEGIDVEYCQALAAAVLGDKTKV
KYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLNFVGVNYYDGQGFMVKKELGLTSAQELDGASVCVQSGTTTEL
NLADYFRNSGMSYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLADPKSAQVLPEIISKEPLGPVVRQDDDKWF
NVAKWTLSAMINAEEYGISSKNADEMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVIKQVGNYGESFERTVGTGSPLQ
ISRGVNALWNAGGFMYAPPIR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=217, Percent_Identity=24.4239631336406, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36759; Mature: 36628

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKLTLLASVVAASTAMMATSASAAESTLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWE
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
GIDVEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLN
CCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEE
FVGVNYYDGQGFMVKKELGLTSAQELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFD
EEEEEEECCCCEEEECCCCCCCHHHCCCCEEEEECCCCCEEEHHHHHHCCCCCCCCEEEE
TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLADPKSAQVLPEIISKEPLGPVVRQDDDKW
CCHHCCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCH
FNVAKWTLSAMINAEEYGISSKNADEMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVI
HHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH
KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR
HHHHCCCHHHHHHCCCCCCEEECCCCHHHHCCCCEEECCCCC
>Mature Secondary Structure 
TNKLTLLASVVAASTAMMATSASAAESTLDKVTSQGFLTCGVSTGLPGFSNPNSKGEWE
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
GIDVEYCQALAAAVLGDKTKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTALGLN
CCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEE
FVGVNYYDGQGFMVKKELGLTSAQELDGASVCVQSGTTTELNLADYFRNSGMSYKPVVFD
EEEEEEECCCCEEEECCCCCCCHHHCCCCEEEEECCCCCEEEHHHHHHCCCCCCCCEEEE
TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLADPKSAQVLPEIISKEPLGPVVRQDDDKW
CCHHCCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCH
FNVAKWTLSAMINAEEYGISSKNADEMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVI
HHHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH
KQVGNYGESFERTVGTGSPLQISRGVNALWNAGGFMYAPPIR
HHHHCCCHHHHHHCCCCCCEEECCCCHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]