Click here to switch to the map view.

The map label for this gene is 218709353

Identifier: 218709353

GI number: 218709353

Start: 1472084

End: 1472875

Strand: Reverse

Name: 218709353

Synonym: VS_1362

Alternate gene names: NA

Gene position: 1472875-1472084 (Counterclockwise)

Preceding gene: 218709357

Following gene: 218709352

Centisome position: 44.64

GC content: 36.99

Gene sequence:

>792_bases
ATGACTACATTTCACGATATACTTGGTACAGCTAAAGCTTCGACCACACAAGAAATAAAGAAGAGATATAAATTACTTTC
GGCAAAGTGTCACCCTGACAAAGGTGGAACTGGTGCTCTATTTAAGCTTGTAAAGCTAGCATTTGATCGAATCACAGAGG
GTTATGGTGACGATATTTATTCTAAACACGATGAGAATGATGCAAGTCTTGAAAAACAGCTTAGAGCTCAAGTGTCACAA
ATACAAGATGAACTTTCAAGAGAACTTCAAGCTAAAGACCTGCTAAATGAAGAGCTTAAGGAAAGTAAAAGAAAATCTGA
CACTCTTGAGGTTGAGCTACAGCAACAAAGTTATAAACTGGCCGCGTTAGAAAAACACAATAACTCTAAACCATATACAA
CCTATTCTTCCAATAGGATGATGACTTTTTCAATAATTATCATGGCGATATTGACATCAGTCGCAGGGTATACATTGTCA
GAGAGATTGCATAAAAACACGCCAGCTTATAAGGCGGTTCCACCCCAATCTATTTCCAACTCTAACGCTGATAAAAAACT
AACTTATAAGCTCTTACTCATGTCTTTACAAAATGATAAAAACTCAATAGCTGTAGCTCAAGATCTTAGGAAGCGTGGTT
ATCAGGTTTTTGTTGAGCCTTATTCAAATTACTATAATGTCATCGTGTCGGTTTCAACGAGTGATAAACAAGAGGTTGCA
ACGATAATAGATGCTCTCAAGAGCATTACTGGTTCTCAAGCTAGAATTCTAAACTCTGGTGTAACACACTAG

Upstream 100 bases:

>100_bases
TAATAGTTTCCTGAAAGAGTCCACAGTTCTTGAACCATATCATTGAACGTATTTTTTATTATGAAACAATCACAATATAA
CAAATCTCGTACAATATAAA

Downstream 100 bases:

>100_bases
TTAGCTATGGATAAATGCGTTAAGAGATAGCTTTGTAGTGAGATCTAATATAAGTTTTTTAGTGCAAAGTCAGTTTGATT
TTTCAACGTAATATTCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MTTFHDILGTAKASTTQEIKKRYKLLSAKCHPDKGGTGALFKLVKLAFDRITEGYGDDIYSKHDENDASLEKQLRAQVSQ
IQDELSRELQAKDLLNEELKESKRKSDTLEVELQQQSYKLAALEKHNNSKPYTTYSSNRMMTFSIIIMAILTSVAGYTLS
ERLHKNTPAYKAVPPQSISNSNADKKLTYKLLLMSLQNDKNSIAVAQDLRKRGYQVFVEPYSNYYNVIVSVSTSDKQEVA
TIIDALKSITGSQARILNSGVTH

Sequences:

>Translated_263_residues
MTTFHDILGTAKASTTQEIKKRYKLLSAKCHPDKGGTGALFKLVKLAFDRITEGYGDDIYSKHDENDASLEKQLRAQVSQ
IQDELSRELQAKDLLNEELKESKRKSDTLEVELQQQSYKLAALEKHNNSKPYTTYSSNRMMTFSIIIMAILTSVAGYTLS
ERLHKNTPAYKAVPPQSISNSNADKKLTYKLLLMSLQNDKNSIAVAQDLRKRGYQVFVEPYSNYYNVIVSVSTSDKQEVA
TIIDALKSITGSQARILNSGVTH
>Mature_262_residues
TTFHDILGTAKASTTQEIKKRYKLLSAKCHPDKGGTGALFKLVKLAFDRITEGYGDDIYSKHDENDASLEKQLRAQVSQI
QDELSRELQAKDLLNEELKESKRKSDTLEVELQQQSYKLAALEKHNNSKPYTTYSSNRMMTFSIIIMAILTSVAGYTLSE
RLHKNTPAYKAVPPQSISNSNADKKLTYKLLLMSLQNDKNSIAVAQDLRKRGYQVFVEPYSNYYNVIVSVSTSDKQEVAT
IIDALKSITGSQARILNSGVTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29535; Mature: 29404

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFHDILGTAKASTTQEIKKRYKLLSAKCHPDKGGTGALFKLVKLAFDRITEGYGDDIY
CCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
SKHDENDASLEKQLRAQVSQIQDELSRELQAKDLLNEELKESKRKSDTLEVELQQQSYKL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
AALEKHNNSKPYTTYSSNRMMTFSIIIMAILTSVAGYTLSERLHKNTPAYKAVPPQSISN
HHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SNADKKLTYKLLLMSLQNDKNSIAVAQDLRKRGYQVFVEPYSNYYNVIVSVSTSDKQEVA
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCHHHHH
TIIDALKSITGSQARILNSGVTH
HHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure 
TTFHDILGTAKASTTQEIKKRYKLLSAKCHPDKGGTGALFKLVKLAFDRITEGYGDDIY
CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH
SKHDENDASLEKQLRAQVSQIQDELSRELQAKDLLNEELKESKRKSDTLEVELQQQSYKL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
AALEKHNNSKPYTTYSSNRMMTFSIIIMAILTSVAGYTLSERLHKNTPAYKAVPPQSISN
HHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SNADKKLTYKLLLMSLQNDKNSIAVAQDLRKRGYQVFVEPYSNYYNVIVSVSTSDKQEVA
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCCHHHHH
TIIDALKSITGSQARILNSGVTH
HHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA