Click here to switch to the map view.

The map label for this gene is 218709352

Identifier: 218709352

GI number: 218709352

Start: 1470805

End: 1471506

Strand: Reverse

Name: 218709352

Synonym: VS_1361

Alternate gene names: NA

Gene position: 1471506-1470805 (Counterclockwise)

Preceding gene: 218709353

Following gene: 218709348

Centisome position: 44.6

GC content: 38.89

Gene sequence:

>702_bases
ATGATTTTCTGGATTCCCTCTACTGTCACTCAACCGCTCCATTTGTGGGCTAATCTAAAGTCATACACTCCCTTACATTG
CCAGGAGAGCGATTGGAACGGTACGTTTTACCCAGATTTTGAATTGTTGTTAGAAAAGCAATTAGGGATAACATGTCTGT
CTATAGAGATAGATGGTTCGACTATTGAACAGTGCATTGATACGATTTATCGCCATGCTCTAAAAGATAAAGCTACAACT
TTAAAGTACATACATACCCAAAAAGAGTCTCGTCGAGAGCTTTTTTTAAATCAGCTAGAGAGCAATGGAAAGATAGATAT
TGGGCTTTATGACTGTGGTAACCTGCTCTCATTGTTGGATGAAGAAGTTTTACTCTGCTTTCGGTTGAATGGCTCTGTCC
CTGATTATCTAACGTTCTGGTTGGACTACACAGCCAAAAGAGCCAAAATAAAACCTTTACTTCTCACAAATGAAAGAACT
AGATTTCTTGGTAGGTTAAAGGGGGTTGAGAAAGTTACGTTACCAGACTTGACCCGCTGTGAGATTTTGTCAACAAGTTT
AAGATCTCTTAAGTCTTTAACAGGGCAAACCATCGAAAGAGTCGACTTAGAAGACCTGTTATCTATGAGTAATTCTTTGG
AAAAGTTTTTGCACCTAATTCAGCTTAGAGCTGTACGGGGAACCCTTACAAAAATTGAATAG

Upstream 100 bases:

>100_bases
ACAATCATATAAAATAATGGAACTCTAAGGTACATTAAGTTAGACGAGATTGCTTTGCCTGCATAACTGCTTGTTCTGGC
TGATTATTCAAGGATAAACA

Downstream 100 bases:

>100_bases
TGTGAATTTTTGAACATTAGTGATGTACTATTGCCGAAACGACGTGATTTAAAGCAGGTCGAGAAAAGGTTTGCTGAGTG
CGAAGCTATGCTAAATAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MIFWIPSTVTQPLHLWANLKSYTPLHCQESDWNGTFYPDFELLLEKQLGITCLSIEIDGSTIEQCIDTIYRHALKDKATT
LKYIHTQKESRRELFLNQLESNGKIDIGLYDCGNLLSLLDEEVLLCFRLNGSVPDYLTFWLDYTAKRAKIKPLLLTNERT
RFLGRLKGVEKVTLPDLTRCEILSTSLRSLKSLTGQTIERVDLEDLLSMSNSLEKFLHLIQLRAVRGTLTKIE

Sequences:

>Translated_233_residues
MIFWIPSTVTQPLHLWANLKSYTPLHCQESDWNGTFYPDFELLLEKQLGITCLSIEIDGSTIEQCIDTIYRHALKDKATT
LKYIHTQKESRRELFLNQLESNGKIDIGLYDCGNLLSLLDEEVLLCFRLNGSVPDYLTFWLDYTAKRAKIKPLLLTNERT
RFLGRLKGVEKVTLPDLTRCEILSTSLRSLKSLTGQTIERVDLEDLLSMSNSLEKFLHLIQLRAVRGTLTKIE
>Mature_233_residues
MIFWIPSTVTQPLHLWANLKSYTPLHCQESDWNGTFYPDFELLLEKQLGITCLSIEIDGSTIEQCIDTIYRHALKDKATT
LKYIHTQKESRRELFLNQLESNGKIDIGLYDCGNLLSLLDEEVLLCFRLNGSVPDYLTFWLDYTAKRAKIKPLLLTNERT
RFLGRLKGVEKVTLPDLTRCEILSTSLRSLKSLTGQTIERVDLEDLLSMSNSLEKFLHLIQLRAVRGTLTKIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26852; Mature: 26852

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFWIPSTVTQPLHLWANLKSYTPLHCQESDWNGTFYPDFELLLEKQLGITCLSIEIDGS
CEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCH
TIEQCIDTIYRHALKDKATTLKYIHTQKESRRELFLNQLESNGKIDIGLYDCGNLLSLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH
EEVLLCFRLNGSVPDYLTFWLDYTAKRAKIKPLLLTNERTRFLGRLKGVEKVTLPDLTRC
HHEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCEECCCCCHHH
EILSTSLRSLKSLTGQTIERVDLEDLLSMSNSLEKFLHLIQLRAVRGTLTKIE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFWIPSTVTQPLHLWANLKSYTPLHCQESDWNGTFYPDFELLLEKQLGITCLSIEIDGS
CEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCH
TIEQCIDTIYRHALKDKATTLKYIHTQKESRRELFLNQLESNGKIDIGLYDCGNLLSLLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH
EEVLLCFRLNGSVPDYLTFWLDYTAKRAKIKPLLLTNERTRFLGRLKGVEKVTLPDLTRC
HHEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCEECCCCCHHH
EILSTSLRSLKSLTGQTIERVDLEDLLSMSNSLEKFLHLIQLRAVRGTLTKIE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA